Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g003850 Solanum pennellii HOM05D000392 ORTHO05D002065 3.4e-101 371.7 195 100.0
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-94 349.7 192 91.7
Sopen12g007900 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-94 349.7 192 91.7
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-93 346.7 192 92.7
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 4.2e-91 338.2 187 95.2
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen04g007530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen11g017390 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen11g024400 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-90 336.3 192 92.7
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 6.1e-90 334.3 192 92.2
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-88 328.6 184 90.2
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-87 325.1 192 87.5
Sopen03g014380 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-87 325.1 192 86.5
Sopen08g012500 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-81 307.0 184 89.7
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 1.5e-80 303.1 184 85.3
Sopen01g026180 Solanum pennellii HOM05D000002 ORTHO05D002065 4.8e-79 298.1 165 93.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-78 297.0 186 81.2
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.2e-72 276.9 179 81.6
Sopen02g006070 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-70 270.0 156 86.5
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 3.6e-66 255.4 148 87.8
Sopen04g013320 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-60 236.1 143 83.9
ECA236G2047 Erigeron canadensis HOM05D000002 ORTHO05D002065 8.9e-57 224.2 199 56.8
Sopen03g009140 Solanum pennellii HOM05D000392 ORTHO05D002065 3.2e-54 215.7 192 62.5
Sopen01g028820 Solanum pennellii HOM05D000392 ORTHO05D000610 5.4e-54 214.9 192 62.5
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-51 207.2 199 58.3
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen07g029700 Solanum pennellii HOM05D000392 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-51 206.1 199 57.8
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen05g014660 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen12g009220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-51 205.7 199 57.8
Sopen04g027510 Solanum pennellii HOM05D002075 ORTHO05D002065 7.3e-51 204.5 199 57.3
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-49 198.4 199 56.8
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-49 198.4 199 56.8
Sopen01g001570 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 2.2e-47 193.0 195 51.8
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen05g014110 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g004880 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g006140 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen08g017740 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen10g021340 Solanum pennellii HOM05D003930 ORTHO05D004742 2.2e-47 193.0 195 51.8
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-47 193.0 195 51.8
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 2.9e-47 192.6 199 54.8
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 8.3e-47 191.0 195 51.8
SHI28752 Sapria himalayana HOM05D000392 ORTHO05D002065 1.4e-46 190.3 192 50.5
Sopen04g006280 Solanum pennellii HOM05D000392 ORTHO05D002065 1.9e-46 189.9 195 51.3
Sopen05g008440 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-46 189.9 195 51.3
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 1.9e-46 189.9 195 51.3
Sopen11g015820 Solanum pennellii HOM05D000002 ORTHO05D002065 7.1e-46 188.0 190 56.3
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-45 186.8 195 51.3
Sopen05g009350 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-45 186.8 194 50.5
Sopen03g021110 Solanum pennellii HOM05D000392 ORTHO05D002065 2.3e-44 183.0 194 50.0
Sopen05g027020 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-43 180.3 184 59.2
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 7.3e-43 177.9 199 50.3
Sopen05g016150 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-42 176.0 196 48.0
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 4.7e-42 175.3 86 95.3
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 4.0e-41 172.2 242 41.3
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 7.6e-40 167.9 236 40.7
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 7.6e-40 167.9 216 44.0
Sopen07g021750 Solanum pennellii HOM05D000002 ORTHO05D002065 7.6e-40 167.9 176 50.0
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 9.9e-40 167.5 236 41.9
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 1.3e-39 167.2 204 45.6
ECA247G2202 Erigeron canadensis HOM05D000392 ORTHO05D002065 2.9e-39 166.0 168 53.0
Sopen09g011890 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-39 165.2 180 52.8
ECA232G3016 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.2e-37 160.6 151 53.0
RcHm_v2.0_Chr2g0163801 Rosa chinensis HOM05D000002 ORTHO05D002065 1.2e-37 160.6 226 42.9
ECA246G4272 Erigeron canadensis HOM05D000392 ORTHO05D002065 2.7e-37 159.5 204 45.1
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 195 44.6
Sopen05g008480 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-36 156.0 91 86.8
Sopen10g006760 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-35 153.3 194 45.4
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 9.6e-35 151.0 219 40.6
Sopen02g003420 Solanum pennellii HOM05D000002 ORTHO05D002065 8.1e-34 147.9 166 47.0
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 1.2e-32 144.1 222 39.6
RcHm_v2.0_Chr5g0012171 Rosa chinensis HOM05D000002 ORTHO05D002065 1.2e-32 144.1 211 38.9
FvH4_7g15611 Fragaria vesca HOM05D000392 ORTHO05D002065 2.6e-32 142.9 222 39.2
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 5.8e-32 141.7 222 39.6
FvH4_3g41702 Fragaria vesca HOM05D000002 ORTHO05D002065 1.4e-30 137.1 222 39.6
MELO3C030744.2 Cucumis melo HOM05D000002 ORTHO05D002065 4.6e-29 132.1 92 64.1
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-26 123.6 57 98.2
Sopen12g020570 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-26 123.6 57 98.2
ECA246G2492 Erigeron canadensis HOM05D000002 ORTHO05D002065 2.8e-26 122.9 165 45.5
CAN.G151.18 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-25 118.2 91 65.9
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-23 113.6 112 48.2
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 3.8e-23 112.5 111 48.6
Sopen03g024570 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-23 112.1 114 48.2
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 6.4e-23 111.7 76 60.5
AUR62005098 Chenopodium quinoa HOM05D000392 ORTHO05D000610 1.4e-22 110.5 83 59.0
AUR62023450 Chenopodium quinoa HOM05D001889 ORTHO05D001853 3.2e-22 109.4 83 57.8
AUR62017492 Chenopodium quinoa HOM05D000301 ORTHO05D017211 5.4e-22 108.6 83 59.0
HanXRQChr15g0481031 Helianthus annuus HOM05D000002 ORTHO05D002065 5.4e-22 108.6 89 52.8
AUR62002835 Chenopodium quinoa HOM05D000178 ORTHO05D000229 1.6e-21 107.1 83 57.8
Sopen01g021430 Solanum pennellii HOM05D002156 ORTHO05D002328 3.5e-21 105.9 65 83.1
RcHm_v2.0_Chr2g0129881 Rosa chinensis HOM05D000002 ORTHO05D002065 7.9e-21 104.8 86 57.0
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.3e-20 104.0 61 70.5
TPR.G25331 Trifolium pratense HOM05D000002 ORTHO05D002065 1.8e-20 103.6 180 37.2
ECA248G3881 Erigeron canadensis HOM05D000392 ORTHO05D000610 1.9e-19 100.1 75 64.0
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-18 95.9 142 46.5
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 6.2e-18 95.1 85 58.8
FvH4_6g39331 Fragaria vesca HOM05D000002 ORTHO05D002065 6.2e-18 95.1 208 32.2
AUR62012577 Chenopodium quinoa HOM05D000392 ORTHO05D000610 1.1e-17 94.4 71 56.3
ClCG08G000360 Citrullus lanatus HOM05D000743 ORTHO05D000580 1.4e-17 94.0 156 39.1
SHI11617 Sapria himalayana HOM05D000002 ORTHO05D002065 3.1e-17 92.8 83 49.4
SHI11938 Sapria himalayana HOM05D000392 ORTHO05D002065 1.2e-16 90.9 109 44.0
Sopen04g022960 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-16 89.7 42 95.2
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 3.4e-16 89.4 45 88.9
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 7.6e-16 88.2 57 70.2
Sopen02g005490 Solanum pennellii HOM05D000002 ORTHO05D002065 4.2e-14 82.4 44 77.3
ECA234G1106 Erigeron canadensis HOM05D000392 ORTHO05D002065 5.5e-14 82.0 69 59.4
PSO013G0066 Papaver somniferum HOM05D000392 ORTHO05D002065 1.6e-13 80.5 115 47.0
Sopen08g016220 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-13 80.5 96 44.8
Medtr3g087960 Medicago truncatula HOM05D000392 ORTHO05D002065 3.5e-13 79.3 75 49.3
SHI13819 Sapria himalayana HOM05D000392 ORTHO05D002065 3.5e-13 79.3 132 35.6
Sopen08g004970 Solanum pennellii HOM05D000392 ORTHO05D000610 3.5e-13 79.3 42 81.0
SHI04535 Sapria himalayana HOM05D010133 ORTHO05D002065 1.0e-12 77.8 85 49.4
SHI04811 Sapria himalayana HOM05D000392 ORTHO05D002065 1.8e-12 77.0 62 53.2
ECA232G3918 Erigeron canadensis HOM05D000392 ORTHO05D002065 9.6e-11 71.2 69 59.4
Sopen02g022990 Solanum pennellii HOM05D000392 ORTHO05D001257 1.3e-10 70.9 59 61.0
ECA236G2851 Erigeron canadensis HOM05D000002 ORTHO05D002065 3.7e-10 69.3 48 60.4
SHI17322 Sapria himalayana HOM05D000392 ORTHO05D002065 8.2e-10 68.2 58 58.6
SHI28133 Sapria himalayana HOM05D000392 ORTHO05D001257 8.2e-10 68.2 109 37.6
RcHm_v2.0_Chr7g0218471 Rosa chinensis HOM05D000002 ORTHO05D002065 4.0e-09 65.9 82 41.5
SHI30243 Sapria himalayana HOM05D000392 ORTHO05D002065 5.3e-09 65.5 60 48.3
PSO210G1678 Papaver somniferum HOM05D000392 ORTHO05D002065 2.2e-07 60.1 78 52.6
SHI07551 Sapria himalayana HOM05D010133 ORTHO05D002065 6.5e-07 58.5 55 56.4
SHI29116 Sapria himalayana HOM05D000392 ORTHO05D000610 6.5e-07 58.5 52 50.0
SHI05138 Sapria himalayana HOM05D000004 ORTHO05D367641 1.9e-06 57.0 45 53.3
CAN.G587.32 Capsicum annuum HOM05D000002 ORTHO05D000001 7.1e-06 55.1 86 41.9
SHI35846 Sapria himalayana HOM05D000392 ORTHO05D366916 9.3e-06 54.7 34 64.7
Sopen05g009660 Solanum pennellii HOM05D000002 ORTHO05D010545 9.3e-06 54.7 31 80.6


User provided reference genes

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