Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 8.8e-154 547.0 286 100.0
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 2.4e-143 512.3 286 90.9
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 2.2e-136 489.2 273 87.9
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 4.8e-136 488.0 274 88.7
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 8.3e-136 487.3 287 85.0
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 8.3e-136 487.3 287 85.0
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 2.4e-135 485.7 291 86.9
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 3.1e-135 485.3 273 88.3
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 3.1e-135 485.3 272 87.1
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 4.1e-135 485.0 273 87.5
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 4.1e-135 485.0 287 86.8
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 7.0e-135 484.2 287 86.8
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 9.1e-135 483.8 287 83.3
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 1.6e-134 483.0 287 85.0
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 2.0e-134 482.6 273 87.2
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 2.7e-134 482.3 290 86.6
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 3.5e-134 481.9 323 82.0
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 5.9e-134 481.1 287 86.1
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 1.3e-133 479.9 273 86.8
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 1.3e-133 479.9 287 85.7
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 5.0e-133 478.0 273 86.1
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 5.0e-133 478.0 273 86.4
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 5.0e-133 478.0 289 85.5
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 6.5e-133 477.6 287 82.6
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 1.1e-132 476.9 274 86.9
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 1.1e-132 476.9 273 85.7
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 1.1e-132 476.9 275 85.5
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 1.5e-132 476.5 272 86.8
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.9e-132 476.1 287 82.6
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 1.9e-132 476.1 291 85.6
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 4.2e-132 474.9 275 85.5
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 9.4e-132 473.8 273 85.0
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 9.4e-132 473.8 271 86.0
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 2.7e-131 472.2 289 82.0
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 4.7e-131 471.5 273 85.7
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 8.0e-131 470.7 287 80.8
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 1.4e-130 469.9 286 83.2
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.8e-130 469.5 317 79.5
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 2.3e-130 469.2 292 83.6
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.3e-130 469.2 276 84.4
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 4.0e-130 468.4 273 84.2
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 5.2e-130 468.0 274 84.7
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 5.2e-130 468.0 274 84.3
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 6.8e-130 467.6 322 78.3
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 1.2e-129 466.8 287 82.6
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 5.7e-129 464.5 288 81.6
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.7e-128 463.0 273 84.2
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 1.7e-128 463.0 268 85.1
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.2e-128 462.6 287 81.2
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 4.9e-128 461.5 273 84.6
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 8.3e-128 460.7 288 84.0
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.1e-127 460.3 287 82.9
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 1.4e-127 459.9 293 82.3
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 1.8e-127 459.5 273 83.9
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.4e-127 459.1 274 83.6
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 5.4e-127 458.0 287 80.5
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 1.2e-126 456.8 272 83.8
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.6e-126 456.4 274 83.6
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.5e-126 455.3 288 80.2
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 4.5e-126 454.9 273 81.7
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 4.5e-126 454.9 273 81.7
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 1.0e-125 453.8 330 73.0
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 2.3e-125 452.6 287 80.8
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 5.0e-125 451.4 296 81.8
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 6.6e-125 451.1 275 81.5
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 8.6e-125 450.7 289 78.9
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 5.6e-124 448.0 282 81.6
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 1.2e-123 446.8 273 81.7
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 1.6e-123 446.4 296 76.7
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 2.1e-123 446.0 289 79.2
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 2.8e-123 445.7 273 79.1
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 1.8e-122 443.0 293 79.2
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 1.8e-122 443.0 291 80.4
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 1.8e-122 443.0 291 80.8
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 6.8e-122 441.0 285 77.9
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 8.9e-122 440.7 282 80.9
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 8.9e-122 440.7 306 74.8
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.2e-121 440.3 285 77.5
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 2.0e-121 439.5 258 84.5
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 3.4e-121 438.7 290 78.3
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 4.4e-121 438.3 293 74.7
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 4.4e-121 438.3 310 73.9
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 1.7e-120 436.4 309 72.8
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 4.9e-120 434.9 273 78.0
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 1.4e-119 433.3 292 77.7
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 1.4e-119 433.3 290 81.0
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 3.2e-119 432.2 296 76.4
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 9.2e-119 430.6 287 77.7
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 1.2e-118 430.3 273 76.9
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 1.2e-118 430.3 272 77.9
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 1.2e-118 430.3 291 77.7
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 1.2e-118 430.3 291 77.7
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 3.5e-118 428.7 292 77.4
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 5.9e-118 427.9 310 75.5
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 1.3e-117 426.8 313 71.9
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 1.3e-117 426.8 288 75.3
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.7e-117 426.4 278 74.1
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 3.9e-117 425.2 297 73.1
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 8.6e-117 424.1 275 76.4
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 2.5e-116 422.5 296 79.4
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 1.6e-115 419.9 272 76.5
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 1.6e-115 419.9 272 76.5
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 4.7e-115 418.3 276 75.0
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 1.0e-114 417.2 276 74.6
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 4.0e-114 415.2 287 73.2
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 8.9e-114 414.1 272 80.9
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 8.9e-114 414.1 291 70.4
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 2.2e-112 409.5 290 79.0
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 3.7e-112 408.7 292 78.4
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 6.2e-107 391.3 222 86.9
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 1.1e-106 390.6 235 83.4
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.0e-105 386.3 264 72.3
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 1.7e-104 383.3 224 84.4
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 5.8e-97 358.2 254 71.3
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 4.9e-96 355.1 275 68.4
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 7.8e-94 347.8 253 69.6
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 6.8e-90 334.7 180 94.4
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.7e-88 330.1 205 80.0
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 2.1e-86 323.2 280 60.7
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 2.7e-86 322.8 278 60.4
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 3.5e-86 322.4 282 61.0
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 3.5e-86 322.4 200 84.5
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.0e-85 320.9 246 67.5
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 1.7e-85 320.1 267 62.9
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 3.3e-84 315.8 225 76.0
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 6.2e-83 311.6 293 57.7
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.4e-79 299.7 202 70.3
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 1.2e-78 297.4 190 77.9
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 3.9e-77 292.4 181 80.7
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 1.5e-73 280.4 263 56.3
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 2.2e-64 250.0 246 59.3
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 2.5e-63 246.5 189 66.1
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 5.3e-58 228.8 147 76.9
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 3.1e-50 203.0 110 96.4
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.7e-48 197.2 110 86.4
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 1.4e-47 194.1 104 88.5
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 1.3e-43 181.0 109 82.6
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 2.2e-43 180.3 116 76.7
CAN.G678.10 Capsicum annuum HOM05D004147 ORTHO05D005606 5.3e-42 175.6 104 83.7
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 7.7e-41 171.8 137 74.5
Potri.013G061100 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.9e-40 169.9 264 39.0
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.7e-38 163.3 95 94.7
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 3.1e-34 149.8 94 79.8
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 5.3e-34 149.1 92 76.1
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 6.5e-32 142.1 83 81.9
PRCOL_00001079 Prasinoderma coloniale HOM05D004147 ORTHO05D005606 1.9e-31 140.6 257 34.6
Cre06.g278208 Chlamydomonas reinhardtii HOM05D004147 ORTHO05D005606 8.8e-29 131.7 250 32.8
Lsat_1_v5_gn_4_94280 Lactuca sativa HOM05D004147 ORTHO05D005606 1.5e-28 131.0 216 39.4
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 1.1e-26 124.8 66 87.9
TWI32G1322 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.1e-26 123.2 257 32.7
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 1.2e-25 121.3 186 42.5
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 2.7e-25 120.2 118 59.3
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 2.7e-25 120.2 118 59.3
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 1.7e-24 117.5 118 59.3
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 2.2e-24 117.1 118 59.3
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 3.8e-24 116.3 105 63.8
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 5.0e-24 115.9 118 58.5
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 3.2e-23 113.2 118 57.6
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 5.5e-23 112.5 118 57.6
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 6.3e-19 99.0 153 39.9
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 8.3e-19 98.6 153 39.9
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 1.2e-17 94.7 153 39.2
TAR623G1050 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.3e-16 91.3 59 81.4
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 2.2e-16 90.5 83 61.4
HanXRQChr10g0307541 Helianthus annuus HOM05D004147 ORTHO05D005606 5.5e-15 85.9 46 82.6
Lsat_1_v5_gn_8_97821 Lactuca sativa HOM05D004147 ORTHO05D005606 8.8e-13 78.6 43 86.0


User provided reference genes

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