Gene: Solyc01g049680.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g049680.3
  • Transcript Identifier Solyc01g049680.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 41222573-41223292 : negative

Gene Family Information

  • ID HOM05D004147
  • #Genes/#Species 170/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g049680.3.1
  • uniprot A0A3Q7EDB7
  • gene_id Solyc01g049680

Descriptions

  • Description Transcription factor Pur-alpha 1 (AHRD V3.3 *** A0A2G2W459_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT2G32080

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IBA
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0032422
IBA
IEA
GOA Databasepurine-rich negative regulatory element binding
GO:0032422
IEA
InterPropurine-rich negative regulatory element binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G32080

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G32080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006628 Purine-rich element binding protein family
Mapman id Description
35.1 not assigned.annotated