Gene: Solyc01g049680.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g049680.3
- Transcript Identifier Solyc01g049680.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 41222573-41223292 : negative
Gene Family Information
- ID HOM05D004147
- #Genes/#Species 170/94
- Phylogenetic origin
- ID ORTHO05D005606
- #Genes/#Species 155/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g049680.3.1
- uniprot A0A3Q7EDB7
- gene_id Solyc01g049680
Descriptions
- Description Transcription factor Pur-alpha 1 (AHRD V3.3 *** A0A2G2W459_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G32080 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000977 | IBA IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
GO:0032422 | IBA IEA | GOA Database | purine-rich negative regulatory element binding | |
GO:0032422 | IEA | InterPro | purine-rich negative regulatory element binding | |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G32080 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IBA IEA | GOA Database | nucleus | |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G32080 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR006628 | Purine-rich element binding protein family |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |