Gene: Sopen01g025520
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g025520
- Transcript Identifier Sopen01g025520.1
- Gene Type Coding gene
- Location Spenn-ch01 : 77785136-77795385 : negative
Gene Family Information
- ID HOM05D004147
- #Genes/#Species 170/94
- Phylogenetic origin
- ID ORTHO05D005606
- #Genes/#Species 155/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g025520.1
Descriptions
- Description similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication | purin-rich alpha 1 (PUR ALPHA-1) | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: response to cadmium ion | LOCATED IN: cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: PUR-alpha/beta/gamma, DNA/RNA-binding
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G32080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0032422 | IEA | InterPro | purine-rich negative regulatory element binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G32080 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G32080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006628 | Purine-rich element binding protein family |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |