Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g001540 Solanum pennellii HOM05D005410 ORTHO05D007394 7.0e-145 517.3 270 100.0
PGSC0003DMG400032122 Solanum tuberosum HOM05D005410 ORTHO05D007394 3.1e-140 501.9 270 97.8
Nitab4.5_0000551g0050 Nicotiana tabacum HOM05D005410 ORTHO05D007394 3.6e-133 478.4 270 91.5
Nitab4.5_0006195g0040 Nicotiana tabacum HOM05D005410 ORTHO05D007394 2.0e-131 472.6 265 91.3
CAN.G1834.14 Capsicum annuum HOM05D005410 ORTHO05D007394 1.7e-130 469.5 276 89.5
Sabra03G0165200 Salix brachista HOM05D005410 ORTHO05D007394 3.5e-120 435.3 277 82.7
Peaxi162Scf00036g00221 Petunia axillaris HOM05D005410 ORTHO05D007394 1.7e-119 433.0 271 85.6
SalBow3G3111 Salvia bowleyana HOM05D005410 ORTHO05D007394 2.3e-119 432.6 268 82.5
vmacro17045 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 5.1e-119 431.4 274 81.8
SGA_v2.0_scaffold3G01679 Striga asiatica HOM05D005410 ORTHO05D007394 2.5e-118 429.1 270 81.1
Oeu023977.1 Olea europaea HOM05D005410 ORTHO05D007394 9.6e-118 427.2 252 86.9
BcaB02g10821 Brassica carinata HOM05D005410 ORTHO05D007394 1.6e-117 426.4 276 79.3
Cpa.g.sc119.36 Carica papaya HOM05D005410 ORTHO05D007394 2.1e-117 426.0 277 80.5
MSTRG.12800 Avicennia marina HOM05D005410 ORTHO05D007394 6.2e-117 424.5 276 80.8
Oeu023974.1 Olea europaea HOM05D005410 ORTHO05D007394 8.1e-117 424.1 252 86.5
Manes.15G110100 Manihot esculenta HOM05D005410 ORTHO05D007394 4.0e-116 421.8 272 80.9
Migut.N00542 Erythranthe guttata HOM05D005410 ORTHO05D007394 5.3e-116 421.4 269 81.4
FvH4_3g45781 Fragaria vesca HOM05D005410 ORTHO05D007394 5.3e-116 421.4 272 78.7
FAN11G0543 Fragaria x ananassa HOM05D005410 ORTHO05D007394 5.3e-116 421.4 272 78.7
FAN11G0605 Fragaria x ananassa HOM05D005410 ORTHO05D007394 5.3e-116 421.4 272 78.7
SGA_v2.0_scaffold6G03314 Striga asiatica HOM05D005410 ORTHO05D007394 6.9e-116 421.0 270 80.0
PGR102G1996 Punica granatum HOM05D005410 ORTHO05D007394 9.0e-116 420.6 267 82.0
C06p16070 Brassica napus HOM05D005410 ORTHO05D007394 1.5e-115 419.9 274 79.2
BolC6t36806H Brassica oleracea HOM05D005410 ORTHO05D007394 1.5e-115 419.9 274 79.2
FAN16G2022 Fragaria x ananassa HOM05D005410 ORTHO05D007394 1.5e-115 419.9 272 78.7
Thecc.09G203200 Theobroma cacao HOM05D005410 ORTHO05D007394 1.5e-115 419.9 273 79.9
AL1G63500 Arabidopsis lyrata HOM05D005410 ORTHO05D007394 2.0e-115 419.5 273 79.9
Gohir.D04G130700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 2.0e-115 419.5 271 81.5
Gohir.A04G090700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 2.6e-115 419.1 271 81.5
FAN25G1403 Fragaria x ananassa HOM05D005410 ORTHO05D007394 3.4e-115 418.7 272 78.3
CARHR045150 Cardamine hirsuta HOM05D005410 ORTHO05D007394 4.4e-115 418.3 271 80.4
COL.COLO4_07519 Corchorus olitorius HOM05D005410 ORTHO05D007394 4.4e-115 418.3 274 80.7
Gorai.012G114400 Gossypium raimondii HOM05D005410 ORTHO05D007394 4.4e-115 418.3 271 81.2
CiPaw.14G137400 Carya illinoinensis HOM05D005410 ORTHO05D007394 2.2e-114 416.0 277 77.6
A05p17460 Brassica napus HOM05D005410 ORTHO05D007394 2.9e-114 415.6 277 77.6
BraA05t20641Z Brassica rapa HOM05D005410 ORTHO05D007394 2.9e-114 415.6 277 77.6
QL01p010651 Quercus lobata HOM05D005410 ORTHO05D007394 2.9e-114 415.6 278 77.7
Thhalv10011629m.g Eutrema salsugineum HOM05D005410 ORTHO05D007394 3.8e-114 415.2 251 82.9
CiPaw.13G177700 Carya illinoinensis HOM05D005410 ORTHO05D007394 4.9e-114 414.8 279 78.1
CsaV3_4G017550 Cucumis sativus L. HOM05D005410 ORTHO05D007394 4.9e-114 414.8 269 78.8
THA.LOC104810318 Tarenaya hassleriana HOM05D005410 ORTHO05D007394 4.2e-113 411.8 278 79.1
BcaC08g44199 Brassica carinata HOM05D005410 ORTHO05D007394 7.1e-113 411.0 278 76.6
RcHm_v2.0_Chr5g0083861 Rosa chinensis HOM05D005410 ORTHO05D007394 7.1e-113 411.0 276 76.1
unitig_0.g1148 Utricularia gibba HOM05D005410 ORTHO05D007394 9.3e-113 410.6 269 80.3
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 1.2e-112 410.2 271 77.9
Lj1A521T33 Lonicera japonica HOM05D005410 ORTHO05D007394 1.2e-112 410.2 279 77.8
Lj1A522T64 Lonicera japonica HOM05D005410 ORTHO05D007394 1.2e-112 410.2 279 77.8
Sed0021908 Sechium edule HOM05D005410 ORTHO05D007394 1.2e-112 410.2 273 78.8
Cc01_g00190 Coffea canephora HOM05D005410 ORTHO05D007394 2.7e-112 409.1 251 81.7
Lj4g0005740 Lotus japonicus HOM05D005410 ORTHO05D007394 2.7e-112 409.1 275 77.1
MD03G1003100 Malus domestica HOM05D005410 ORTHO05D007394 4.6e-112 408.3 282 75.5
Atru.chr3.2102 Acer truncatum HOM05D005410 ORTHO05D007394 6.0e-112 407.9 275 77.8
Sp1g41090 Schrenkiella parvula HOM05D005410 ORTHO05D007394 6.0e-112 407.9 250 81.6
Atru.chr3.2395 Acer truncatum HOM05D005410 ORTHO05D007394 7.8e-112 407.5 276 77.5
Duzib168G1987 Durio zibethinus HOM05D005410 ORTHO05D007394 1.0e-111 407.1 274 78.8
MD11G1002900 Malus domestica HOM05D005410 ORTHO05D007394 1.0e-111 407.1 280 76.1
HanXRQChr07g0186621 Helianthus annuus HOM05D005410 ORTHO05D007394 1.3e-111 406.8 270 76.7
CANSAT11G0129 Cannabis sativa HOM05D005410 ORTHO05D007394 1.7e-111 406.4 252 82.9
ECA233G0964 Erigeron canadensis HOM05D005410 ORTHO05D007394 3.0e-111 405.6 271 76.8
Glyma.08G124900 Glycine max HOM05D005410 ORTHO05D007394 3.9e-111 405.2 278 77.0
Phvul.002G247200 Phaseolus vulgaris HOM05D005410 ORTHO05D007394 8.7e-111 404.1 274 77.0
Potri.003G222200 Populus trichocarpa HOM05D005410 ORTHO05D007394 1.1e-110 403.7 244 84.8
Rhsim13G0233300 Rhododendron simsii HOM05D005410 ORTHO05D007394 1.1e-110 403.7 268 79.5
Aa31LG10G770 Aethionema arabicum HOM05D005410 ORTHO05D007394 1.5e-110 403.3 278 75.5
Carub.0001s4397 Capsella rubella HOM05D005410 ORTHO05D007394 1.5e-110 403.3 275 76.4
AT1G55480 Arabidopsis thaliana HOM05D005410 ORTHO05D007394 1.9e-110 402.9 274 76.3
DCAR_023818 Daucus carota HOM05D005410 ORTHO05D007394 1.9e-110 402.9 246 82.9
Oeu060891.1 Olea europaea HOM05D005410 ORTHO05D007394 1.9e-110 402.9 269 78.8
Actinidia16239 Actinidia chinensis HOM05D005410 ORTHO05D007394 2.5e-110 402.5 271 79.7
Aqoxy1G00490 Aquilegia oxysepala HOM05D005410 ORTHO05D007394 2.5e-110 402.5 274 76.6
CSS0020515 Camellia sinensis var. sinensis HOM05D005410 ORTHO05D007394 2.5e-110 402.5 277 77.6
Medtr8g088420 Medicago truncatula HOM05D005410 ORTHO05D007394 2.5e-110 402.5 277 75.5
AUR62005847 Chenopodium quinoa HOM05D005410 ORTHO05D007394 3.3e-110 402.1 281 74.7
Eucgr.J01758 Eucalyptus grandis HOM05D005410 ORTHO05D007394 3.3e-110 402.1 277 76.9
Prupe.6G002700 Prunus persica HOM05D005410 ORTHO05D007394 3.3e-110 402.1 279 76.3
Glyma.05G166800 Glycine max HOM05D005410 ORTHO05D007394 5.6e-110 401.4 280 75.7
Lsat_1_v5_gn_6_55740 Lactuca sativa HOM05D005410 ORTHO05D007394 7.3e-110 401.0 270 77.8
TAR369G0462 Trochodendron aralioides HOM05D005410 ORTHO05D007394 2.8e-109 399.1 276 77.2
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 3.6e-109 398.7 267 77.2
arahy.Tifrunner.gnm1.ann1.63K8WX Arachis hypogaea HOM05D005410 ORTHO05D007394 8.1e-109 397.5 247 81.8
arahy.Tifrunner.gnm1.ann1.GYZC8Z Arachis hypogaea HOM05D005410 ORTHO05D007394 1.1e-108 397.1 247 81.8
Nn2g15872 Nelumbo nucifera HOM05D005410 ORTHO05D007394 1.1e-108 397.1 279 77.1
Sc09g0000010 Simmondsia chinensis HOM05D005410 ORTHO05D007394 1.1e-108 397.1 254 81.1
HPP92_001905 Vanilla planifolia HOM05D005410 ORTHO05D007394 1.4e-108 396.7 268 78.0
Dinv13479 Davidia involucrata HOM05D005410 ORTHO05D007394 1.8e-108 396.4 243 83.1
EL10Ac4g10389 Beta vulgaris HOM05D005410 ORTHO05D007394 5.3e-108 394.8 243 83.1
Hund13622 Selenicereus undatus HOM05D005410 ORTHO05D007394 1.5e-107 393.3 277 73.6
Lalb_Chr12g0204581 Lupinus albus HOM05D005410 ORTHO05D007394 2.6e-107 392.5 267 76.0
MBI05_g04454_MAGBIO Magnolia biondii HOM05D005410 ORTHO05D007394 2.6e-107 392.5 282 74.5
Haze_22935 Corylus avellana HOM05D005410 ORTHO05D007394 4.5e-107 391.7 279 74.9
VMungo0251G1592 Vigna mungo HOM05D005410 ORTHO05D007394 4.5e-107 391.7 278 74.1
Ciclev10015873m.g Citrus clementina HOM05D005410 ORTHO05D007394 2.9e-106 389.0 245 80.0
AUR62032839 Chenopodium quinoa HOM05D005410 ORTHO05D007394 1.4e-105 386.7 242 81.4
PSO339G0242 Papaver somniferum HOM05D005410 ORTHO05D007394 1.4e-105 386.7 269 75.5
PSO384G0864 Papaver somniferum HOM05D005410 ORTHO05D007394 1.4e-105 386.7 269 75.5
ATR0697G079 Amborella trichopoda HOM05D005410 ORTHO05D007394 1.2e-104 383.6 266 76.7
Zm00001eb300990 Zea mays HOM05D005410 ORTHO05D007394 3.4e-99 365.5 254 73.6
SEGI_35670 Sequoiadendron giganteum HOM05D005410 ORTHO05D007394 2.3e-95 352.8 245 73.9
GSVIVG01025488001 Vitis vinifera HOM05D005410 ORTHO05D007394 1.4e-89 333.6 210 80.5
TAR623G0245 Trochodendron aralioides HOM05D005410 ORTHO05D007394 2.5e-89 332.8 216 79.6
Os07g0171100 Oryza sativa ssp. japonica HOM05D005410 ORTHO05D007394 8.7e-87 324.3 217 76.0
Pp3c19_15590 Physcomitrium patens HOM05D005410 ORTHO05D007394 2.5e-86 322.8 245 67.8
SMO329G0030 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 2.5e-86 322.8 246 67.1
SMO238G0020 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 5.7e-86 321.6 246 66.7
TPR.G6787 Trifolium pratense HOM05D005410 ORTHO05D007394 1.3e-85 320.5 229 73.4
Cfa009554 Carpinus fangiana HOM05D005410 ORTHO05D007394 6.3e-85 318.2 231 74.0
Mapoly0020s0152 Marchantia polymorpha HOM05D005410 ORTHO05D007394 5.3e-84 315.1 251 66.9
Potri.001G002700 Populus trichocarpa HOM05D005410 ORTHO05D007394 6.5e-82 308.1 277 65.7
arahy.Tifrunner.gnm1.ann1.CQ6EI1 Arachis hypogaea HOM05D005410 ORTHO05D007394 4.7e-72 275.4 247 63.6
CBR_g66797 Chara braunii HOM05D005410 ORTHO05D007394 2.6e-70 269.6 247 56.7
Solyc01g005520.4 Solanum lycopersicum HOM05D005410 ORTHO05D007394 6.3e-69 265.0 139 97.1
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 6.1e-64 248.4 332 47.3
Psat7g064320 Pisum sativum HOM05D005410 ORTHO05D007394 1.2e-59 234.2 165 75.2
vmacro04262 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 1.0e-58 231.1 209 64.1
Pp3c22_13930 Physcomitrium patens HOM05D005410 ORTHO05D007394 2.5e-57 226.5 245 55.5
MELO3C014728.2 Cucumis melo HOM05D005410 ORTHO05D007394 4.4e-54 215.7 142 76.8
Hma1.2p1_0256F.1_g103360 Hydrangea macrophylla HOM05D005410 ORTHO05D007394 7.5e-54 214.9 164 71.3
EL10Ac8g20065 Beta vulgaris HOM05D005410 ORTHO05D007394 3.5e-51 206.1 139 77.0
Ah.06g190610 Amaranthus hybridus HOM05D005410 ORTHO05D007394 7.7e-51 204.9 162 69.8
PRCOL_00004676 Prasinoderma coloniale HOM05D005410 ORTHO05D007394 6.1e-48 195.3 258 41.5
CDE10G0059 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 6.3e-45 185.3 265 45.7
Ciclev10018072m.g Citrus clementina HOM05D005410 ORTHO05D007394 2.3e-39 166.8 105 77.1
AagrBONN_evm.TU.Sc2ySwM_117.774 Anthoceros agrestis HOM05D005410 ORTHO05D007394 1.5e-38 164.1 120 70.0
MCO13G101 Micromonas commoda HOM05D005410 ORTHO05D007394 3.4e-38 162.9 278 37.4
Psat7g062240 Pisum sativum HOM05D005410 ORTHO05D007394 7.5e-38 161.8 252 46.4
Cre01.g031100 Chlamydomonas reinhardtii HOM05D005410 ORTHO05D007394 6.6e-34 148.7 275 33.1
Psat7g064400 Pisum sativum HOM05D005410 ORTHO05D007394 1.2e-30 137.9 108 68.5
Cfa009551 Carpinus fangiana HOM05D005410 ORTHO05D007394 6.4e-21 105.5 70 77.1
Ca_17847_v3 Cicer arietinum L. HOM05D005410 ORTHO05D007394 9.2e-20 101.7 69 65.2
BcaB04g16956 Brassica carinata HOM05D005410 ORTHO05D009181 1.6e-19 100.9 247 33.6
Psat7g064480 Pisum sativum HOM05D005410 ORTHO05D007394 2.1e-16 90.5 109 48.6
C06p10410 Brassica napus HOM05D005410 ORTHO05D040422 4.7e-16 89.4 77 59.7
BolC6t36118H Brassica oleracea HOM05D005410 ORTHO05D040422 4.7e-16 89.4 77 59.7
Psat7g064520 Pisum sativum HOM05D005410 ORTHO05D007394 1.4e-15 87.8 54 77.8
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 6.4e-13 79.0 74 55.4
MCO05G137 Micromonas commoda HOM05D005410 ORTHO05D025019 1.7e-10 70.9 131 31.3
AagrBONN_evm.TU.Sc2ySwM_228.3021 Anthoceros agrestis HOM05D005823 ORTHO05D007536 1.5e-09 67.8 83 36.1
Mapoly0060s0015 Marchantia polymorpha HOM05D005823 ORTHO05D007536 3.3e-09 66.6 102 30.4
Pp3c16_6290 Physcomitrium patens HOM05D005823 ORTHO05D007536 5.6e-09 65.9 83 36.1
PRCOL_00000260 Prasinoderma coloniale HOM05D003036 ORTHO05D008712 2.4e-07 60.5 86 38.4
Hund02967 Selenicereus undatus HOM05D006062 ORTHO05D007613 2.0e-06 57.4 70 42.9
MSTRG.26938 Avicennia marina HOM05D006062 ORTHO05D007613 3.4e-06 56.6 70 42.9
Cre10.g439350 Chlamydomonas reinhardtii HOM05D005410 ORTHO05D025019 5.8e-06 55.8 160 30.0
Nn1g02035 Nelumbo nucifera HOM05D006062 ORTHO05D007613 5.8e-06 55.8 70 41.4
CANSAT21G2164 Cannabis sativa HOM05D006062 ORTHO05D007613 7.6e-06 55.5 70 41.4
Cpa.g.sc39.53 Carica papaya HOM05D006062 ORTHO05D007613 7.6e-06 55.5 70 42.9
Duzib106G1742 Durio zibethinus HOM05D006062 ORTHO05D007613 7.6e-06 55.5 70 41.4
PRCOL_00006506 Prasinoderma coloniale HOM05D005410 ORTHO05D025019 7.6e-06 55.5 116 33.6
THA.LOC104820874 Tarenaya hassleriana HOM05D006062 ORTHO05D007613 7.6e-06 55.5 70 42.9
Actinidia18696 Actinidia chinensis HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 41.4
ATR0829G005 Amborella trichopoda HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 42.9
CDE02G0118 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 42.9
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 42.9
Duzib177G0391 Durio zibethinus HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 41.4
Gohir.A02G139100 Gossypium hirsutum HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 41.4
Gohir.D03G049700 Gossypium hirsutum HOM05D006062 ORTHO05D007613 9.9e-06 55.1 70 41.4


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