Gene: Sopen01g001540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g001540
  • Transcript Identifier Sopen01g001540.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 461932-464273 : positive

Gene Family Information

  • ID HOM05D005410
  • #Genes/#Species 141/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g001540.1

Descriptions

  • Description Encodes a member of a novel plant protein family containing a PDZ, a K-box, and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding. | protein containing PDZ domain, a K-box domain, and a TPR region (ZKT) | FUNCTIONS IN: binding | INVOLVED IN: response to wounding | LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , PDZ/DHR/GLGF , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: rubredoxin family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G55480
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT1G55480
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G55480
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT1G55480
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT1G55480
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT1G55480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G55480
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G55480
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G55480
GO:0009575
ISO
PLAZA Integrative Orthologychromoplast stroma AT1G55480
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G55480
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G55480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G55480
GO:0031969
ISO
PLAZA Integrative Orthologychloroplast membrane AT1G55480
GO:0035448
ISO
PLAZA Integrative Orthologyextrinsic component of thylakoid membrane AT1G55480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR036034 PDZ superfamily
Mapman id Description
1.1.1.4.7 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (MET1)