Gene: FAN16G2022

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN16G2022
  • Transcript Identifier FAN16G2022.1
  • Gene Type Coding gene
  • Location Fvb3-3 : 29364793-29370708 : negative

Gene Family Information

  • ID HOM05D005410
  • #Genes/#Species 141/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb3-3-snap-gene-293.41.v1.0.a1
  • pacid 50533359

Descriptions

  • Description PTHR12537//PTHR12537:SF13 - RNA BINDING PROTEIN PUMILIO-RELATED // SUPPRESSOR PROTEIN MPT5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G55480
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT1G55480
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT1G55480
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT1G55480
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT1G55480
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G55480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035448
ISO
PLAZA Integrative Orthologyextrinsic component of thylakoid membrane AT1G55480
GO:0031969
ISO
PLAZA Integrative Orthologychloroplast membrane AT1G55480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G55480
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G55480
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G55480
GO:0009575
ISO
PLAZA Integrative Orthologychromoplast stroma AT1G55480
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G55480
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G55480
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G55480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001313 Pumilio RNA-binding repeat
IPR011989 Armadillo-like helical
IPR033712 Pumilio, RNA binding domain
IPR016024 Armadillo-type fold
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR036034 PDZ superfamily
Mapman id Description
1.1.1.4.7 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (MET1)