Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.2e-69 263.5 135 100.0
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.0e-44 181.0 213 52.1
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.0e-44 181.0 213 52.1
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.0e-44 181.0 213 52.1
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.6e-43 177.6 205 52.7
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.2e-41 173.3 205 51.2
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.7e-38 162.9 104 82.7
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 2.2e-38 162.5 213 48.4
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 8.4e-38 160.6 213 47.9
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.1e-37 160.2 213 47.9
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.1e-37 160.2 190 51.1
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 1.1e-37 160.2 213 47.9
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 5.4e-37 157.9 213 47.9
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 7.1e-37 157.5 213 47.4
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 1.6e-36 156.4 213 46.0
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 2.1e-36 156.0 213 46.5
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 2.7e-36 155.6 219 46.1
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 2.7e-36 155.6 219 46.1
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 3.5e-36 155.2 209 46.4
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 3.5e-36 155.2 209 46.4
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 6.0e-36 154.5 213 46.9
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 6.0e-36 154.5 210 46.2
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 7.8e-36 154.1 213 46.9
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 7.8e-36 154.1 213 46.9
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 7.8e-36 154.1 213 46.9
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 7.8e-36 154.1 213 46.9
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 3.9e-35 151.8 213 46.9
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 8.6e-35 150.6 209 45.5
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 8.6e-35 150.6 219 45.2
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.5e-34 149.8 213 46.0
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.6e-33 146.4 211 45.5
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 3.1e-32 142.1 104 73.1
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 6.9e-32 141.0 104 74.0
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 8.9e-32 140.6 212 44.8
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.6e-31 139.0 213 41.8
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 4.4e-31 138.3 103 72.8
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 9.9e-31 137.1 210 43.8
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 2.9e-30 135.6 103 73.8
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.4e-29 132.5 104 67.3
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 3.2e-29 132.1 210 42.9
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 3.2e-29 132.1 210 42.9
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 3.2e-29 132.1 210 42.9
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 4.2e-29 131.7 88 81.8
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 4.2e-29 131.7 210 42.9
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 5.4e-29 131.3 210 41.9
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.4e-29 131.3 210 41.9
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 4.6e-28 128.3 104 68.3
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.0e-27 125.6 103 67.0
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.0e-27 125.6 103 67.0
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.0e-27 125.6 103 67.0
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.0e-27 125.6 103 67.0
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.0e-27 125.6 103 67.0
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-26 122.9 87 73.6
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 2.5e-26 122.5 261 36.4
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 2.4e-24 115.9 212 40.1
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 6.9e-24 114.4 175 41.7
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 4.5e-23 111.7 205 35.1
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 4.5e-23 111.7 205 35.1
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 1.1e-21 107.1 201 39.3
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.4e-21 105.9 159 47.8
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 4.2e-21 105.1 166 41.6
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 2.7e-20 102.4 214 37.4
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.5e-18 95.9 102 56.9
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 3.1e-16 89.0 103 57.3
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 9.9e-15 84.0 164 37.8
SHI01963 Sapria himalayana HOM05D001987 ORTHO05D006514 4.9e-14 81.6 88 58.0
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.1e-12 76.3 88 55.7
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 7.9e-12 74.3 143 36.4
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 1.0e-11 73.9 145 35.2
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.3e-10 68.6 150 35.3
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.3e-10 68.6 150 35.3
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 4.3e-10 68.6 143 33.6
Solyc05g045826.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-09 66.6 44 84.1
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 3.1e-08 62.4 149 30.9
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 5.8e-07 58.2 134 31.3
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.6e-07 57.8 29 82.8
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 1.7e-06 56.6 29 82.8
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 2.2e-06 56.2 131 30.5
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.2e-06 56.2 29 82.8
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 4.9e-06 55.1 29 79.3
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 6.5e-06 54.7 150 34.0


User provided reference genes

Program Settings