Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072020.1 Solanum lycopersicum HOM05D000218 ORTHO05D000125 2.0e-161 572.4 293 100.0
PGSC0003DMG400023184 Solanum tuberosum HOM05D000218 ORTHO05D000125 4.6e-33 146.0 177 50.3
Solyc03g078630.3 Solanum lycopersicum HOM05D000218 ORTHO05D000125 6.7e-32 142.1 179 49.2
Peaxi162Scf01091g00019 Petunia axillaris HOM05D000218 ORTHO05D000125 8.7e-32 141.7 315 37.1
PGSC0003DMG400021791 Solanum tuberosum HOM05D000218 ORTHO05D000125 1.5e-31 141.0 193 46.6
PGSC0003DMG400014431 Solanum tuberosum HOM05D000218 ORTHO05D000125 1.3e-11 74.7 239 31.8
Nitab4.5_0000081g0210 Nicotiana tabacum HOM05D000218 ORTHO05D000125 1.7e-11 74.3 102 48.0
Peaxi162Scf01309g00008 Petunia axillaris HOM05D000218 ORTHO05D000125 1.7e-11 74.3 116 40.5
HanXRQChr01g0026881 Helianthus annuus HOM05D000218 ORTHO05D000125 3.8e-11 73.2 237 30.0
CSS0017718 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 6.5e-11 72.4 239 31.8
PGR004G2673 Punica granatum HOM05D000218 ORTHO05D000125 6.5e-11 72.4 239 31.8
Carub.0006s2219 Capsella rubella HOM05D000218 ORTHO05D000125 8.5e-11 72.0 239 31.8
Gohir.D01G121000 Gossypium hirsutum HOM05D000218 ORTHO05D000125 8.5e-11 72.0 239 31.8
AL7G44880 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.1e-10 71.6 239 31.4
Solyc07g064130.2 Solanum lycopersicum HOM05D000218 ORTHO05D000125 1.1e-10 71.6 239 31.4
MSTRG.14419 Avicennia marina HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
Ciclev10012652m.g Citrus clementina HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
Gohir.D01G062400 Gossypium hirsutum HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
PSO573G0013 Papaver somniferum HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
PSO724G1227 Papaver somniferum HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
Sopen10g002430 Solanum pennellii HOM05D000218 ORTHO05D000125 1.4e-10 71.2 239 31.4
Oeu035462.1 Olea europaea HOM05D000218 ORTHO05D000125 1.9e-10 70.9 239 31.0
CSS0027475 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 3.2e-10 70.1 239 31.0
BcaC01g02906 Brassica carinata HOM05D000218 ORTHO05D000125 5.5e-10 69.3 234 28.2
AUR62021970 Chenopodium quinoa HOM05D000218 ORTHO05D000125 5.5e-10 69.3 239 31.0
Potri.006G129600 Populus trichocarpa HOM05D000218 ORTHO05D000125 5.5e-10 69.3 239 31.0
CAN.G420.1 Capsicum annuum HOM05D000218 ORTHO05D000125 7.2e-10 68.9 83 45.8
Rhsim04G0149500 Rhododendron simsii HOM05D000218 ORTHO05D000125 7.2e-10 68.9 239 30.5
Gohir.A04G075200 Gossypium hirsutum HOM05D000218 ORTHO05D000125 9.4e-10 68.6 239 30.5
Gohir.D04G114300 Gossypium hirsutum HOM05D000218 ORTHO05D000125 9.4e-10 68.6 239 30.5
AUR62004467 Chenopodium quinoa HOM05D000319 ORTHO05D000125 1.2e-09 68.2 239 30.5
Lj3g0012238 Lotus japonicus HOM05D000218 ORTHO05D000125 1.2e-09 68.2 239 30.5
Prupe.2G185300 Prunus persica HOM05D000218 ORTHO05D000125 1.2e-09 68.2 239 31.0
SHI02163 Sapria himalayana HOM05D000218 ORTHO05D000125 1.2e-09 68.2 239 30.5
AT3G09790 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 1.6e-09 67.8 282 26.6
CDE12G0931 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.6e-09 67.8 243 30.9
AUR62036079 Chenopodium quinoa HOM05D000218 ORTHO05D000125 1.6e-09 67.8 239 30.5
Mapoly0034s0121 Marchantia polymorpha HOM05D000218 ORTHO05D000125 1.6e-09 67.8 239 30.5
BcaC07g40881 Brassica carinata HOM05D000218 ORTHO05D000125 2.1e-09 67.4 118 38.1
AUR62035392 Chenopodium quinoa HOM05D000218 ORTHO05D000125 2.1e-09 67.4 239 30.1
Medtr4g080920 Medicago truncatula HOM05D000218 ORTHO05D000125 2.1e-09 67.4 237 31.2
AagrBONN_evm.TU.Sc2ySwM_344.5186 Anthoceros agrestis HOM05D000218 ORTHO05D000125 2.7e-09 67.0 239 30.1
Oeu013728.1 Olea europaea HOM05D000218 ORTHO05D000125 2.7e-09 67.0 239 30.1
PSO729G0234 Papaver somniferum HOM05D000218 ORTHO05D000125 3.6e-09 66.6 121 34.7
BcaC04g22978 Brassica carinata HOM05D000218 ORTHO05D000125 6.1e-09 65.9 235 28.5
BcaC01g03108 Brassica carinata HOM05D000218 ORTHO05D000125 1.0e-08 65.1 121 35.5
Cc02_g31570 Coffea canephora HOM05D000218 ORTHO05D000125 1.4e-08 64.7 215 32.1
Lj4g0010201 Lotus japonicus HOM05D000218 ORTHO05D000125 1.4e-08 64.7 121 36.4
BcaB08g36029 Brassica carinata HOM05D000218 ORTHO05D000125 2.3e-08 63.9 119 36.1
Gorai.009G418900 Gossypium raimondii HOM05D000218 ORTHO05D000125 3.0e-08 63.5 241 30.3
Cc05_g13290 Coffea canephora HOM05D000218 ORTHO05D000125 3.9e-08 63.2 121 36.4
Glyma.17G042200 Glycine max HOM05D000218 ORTHO05D000125 3.9e-08 63.2 123 36.6
Atru.chr2.3221 Acer truncatum HOM05D000218 ORTHO05D000125 5.1e-08 62.8 121 35.5
HanXRQChr01g0003781 Helianthus annuus HOM05D000218 ORTHO05D000125 5.1e-08 62.8 121 35.5
Phvul.003G123566 Phaseolus vulgaris HOM05D000218 ORTHO05D000125 6.7e-08 62.4 121 35.5
SEGI_09573 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 6.7e-08 62.4 121 35.5
SEGI_11630 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 6.7e-08 62.4 121 35.5
C03p31640 Brassica napus HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 35.5
Gohir.A01G075000 Gossypium hirsutum HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 36.4
Medtr4g088495 Medicago truncatula HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 35.5
PSO017G3312 Papaver somniferum HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 34.7
SEGI_25046 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 35.5
SEGI_39631 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 8.8e-08 62.0 121 35.5
AL6G48900 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.1e-07 61.6 239 28.9
AL6G49350 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.1e-07 61.6 239 28.9
FvH4_6g15622 Fragaria vesca HOM05D000218 ORTHO05D000125 1.1e-07 61.6 121 34.7
Psat7g161800 Pisum sativum HOM05D000218 ORTHO05D000125 1.1e-07 61.6 123 34.1
SEGI_08583 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.1e-07 61.6 121 34.7
Ciclev10012290m.g Citrus clementina HOM05D000218 ORTHO05D000125 1.5e-07 61.2 121 35.5
AL3G21020 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 2.0e-07 60.8 244 28.7
BcaB01g01898 Brassica carinata HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
BcaC01g02856 Brassica carinata HOM05D000218 ORTHO05D000125 2.0e-07 60.8 281 27.0
CARHR252230 Cardamine hirsuta HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 35.5
CDE09G0382 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
Cc02_g31520 Coffea canephora HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
Glyma.13G176100 Glycine max HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
Glyma.13G176400 Glycine max HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
HanXRQChr01g0025861 Helianthus annuus HOM05D000218 ORTHO05D000125 2.0e-07 60.8 237 26.2
Nn2g13625 Nelumbo nucifera HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 35.5
Os04g0628100 Oryza sativa ssp. japonica HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 35.5
PGR083G0527 Punica granatum HOM05D000218 ORTHO05D000125 2.0e-07 60.8 121 34.7
Aqoxy4G00644 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
CiPaw.08G155100 Carya illinoinensis HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
AUR62015654 Chenopodium quinoa HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
AUR62020548 Chenopodium quinoa HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
Duzib093G0663 Durio zibethinus HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
Migut.J00686 Erythranthe guttata HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 33.9
Gohir.A10G015000 Gossypium hirsutum HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
Gohir.D13G145700 Gossypium hirsutum HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
Gorai.013G163500 Gossypium raimondii HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
HanXRQChr01g0025881 Helianthus annuus HOM05D000218 ORTHO05D000125 2.6e-07 60.5 238 26.9
HanXRQChr01g0026831 Helianthus annuus HOM05D000218 ORTHO05D000125 2.6e-07 60.5 276 27.2
Mapoly0080s0025 Marchantia polymorpha HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
PSO541G6244 Papaver somniferum HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
PSO832G4377 Papaver somniferum HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 35.5
SEGI_07206 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
TWI74G0081 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
TWI77G0348 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 2.6e-07 60.5 121 34.7
Cpa.g.sc97.61 Carica papaya HOM05D000218 ORTHO05D000125 3.3e-07 60.1 121 34.7
PSO832G0914 Papaver somniferum HOM05D000218 ORTHO05D000125 3.3e-07 60.1 121 34.7
FvH4_3g21922 Fragaria vesca HOM05D000218 ORTHO05D000125 4.4e-07 59.7 121 36.4
AagrBONN_evm.TU.Sc2ySwM_117.2265 Anthoceros agrestis HOM05D000218 ORTHO05D000125 5.7e-07 59.3 98 38.8
FvH4_7g30960 Fragaria vesca HOM05D000218 ORTHO05D017941 5.7e-07 59.3 124 33.1
Gorai.002G147600 Gossypium raimondii HOM05D000218 ORTHO05D000125 5.7e-07 59.3 118 34.7
GSVIVG01023471001 Vitis vinifera HOM05D000218 ORTHO05D000125 5.7e-07 59.3 118 34.7
HanXRQChr11g0340271 Helianthus annuus HOM05D000218 ORTHO05D000125 7.4e-07 58.9 120 34.2
Manes.10G049100 Manihot esculenta HOM05D000218 ORTHO05D000125 9.7e-07 58.5 234 29.1
Rhsim05G0130800 Rhododendron simsii HOM05D000218 ORTHO05D000125 1.3e-06 58.2 122 35.2
AagrBONN_evm.TU.Sc2ySwM_368.2460 Anthoceros agrestis HOM05D000218 ORTHO05D000125 2.2e-06 57.4 121 34.7
Cc02_g31600 Coffea canephora HOM05D000218 ORTHO05D000125 2.2e-06 57.4 109 34.9
HanXRQChr01g0026001 Helianthus annuus HOM05D000218 ORTHO05D000125 2.2e-06 57.4 276 26.8
HanXRQChr01g0025911 Helianthus annuus HOM05D000218 ORTHO05D000125 2.8e-06 57.0 237 25.3
SEGI_30490 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 2.8e-06 57.0 237 28.3
Cc02_g31580 Coffea canephora HOM05D000218 ORTHO05D000125 3.7e-06 56.6 114 34.2
COL.COLO4_12148 Corchorus olitorius HOM05D000218 ORTHO05D000125 3.7e-06 56.6 119 35.3
HanXRQChr11g0340221 Helianthus annuus HOM05D000218 ORTHO05D000125 3.7e-06 56.6 117 35.0
BcaC04g20030 Brassica carinata HOM05D000218 ORTHO05D000125 4.8e-06 56.2 118 32.2
HanXRQChr10g0301071 Helianthus annuus HOM05D000218 ORTHO05D000125 6.3e-06 55.8 241 27.8
Cc08_g05710 Coffea canephora HOM05D000218 ORTHO05D000125 8.2e-06 55.5 125 32.8
HanXRQChr01g0025941 Helianthus annuus HOM05D000218 ORTHO05D000125 8.2e-06 55.5 211 28.0
PSO229G0037 Papaver somniferum HOM05D000218 ORTHO05D000125 8.2e-06 55.5 109 33.0


User provided reference genes

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