Gene: Solyc07g064130.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g064130.2
  • Transcript Identifier Solyc07g064130.2.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 66234771-66236144 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g064130.2.1
  • uniprot A0A3Q7IBU5
  • gene_id Solyc07g064130

Descriptions

  • Description Polyubiquitin (AHRD V3.3 *** F1SY21_MESCR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0019941
IBA
GOA Databasemodification-dependent protein catabolic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G31340
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT1G31340
GO:0045116
ISO
PLAZA Integrative Orthologyprotein neddylation AT1G31340
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G31340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding
GO:0031386
IBA
GOA Databaseprotein tag
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G31340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G31340
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G31340
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT2G35635

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR019956 Ubiquitin domain
Mapman id Description
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)