Gene: Solyc07g064130.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc07g064130.2
- Transcript Identifier Solyc07g064130.2.1
- Gene Type Coding gene
- Location SL4.0ch07 : 66234771-66236144 : positive
Gene Family Information
- ID HOM05D000218
- #Genes/#Species 1867/96
- Phylogenetic origin
- ID ORTHO05D000125
- #Genes/#Species 1823/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc07g064130.2.1
- uniprot A0A3Q7IBU5
- gene_id Solyc07g064130
Descriptions
- Description Polyubiquitin (AHRD V3.3 *** F1SY21_MESCR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016567 | IBA | GOA Database | protein ubiquitination | |
GO:0019941 | IBA | GOA Database | modification-dependent protein catabolic process | |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G31340 |
GO:0009693 | ISO | PLAZA Integrative Orthology | ethylene biosynthetic process | AT1G31340 |
GO:0045116 | ISO | PLAZA Integrative Orthology | protein neddylation | AT1G31340 |
GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G31340 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0031625 | IBA | GOA Database | ubiquitin protein ligase binding | |
GO:0031386 | IBA | GOA Database | protein tag | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G31340 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IBA | GOA Database | cytoplasm | |
GO:0005634 | IBA | GOA Database | nucleus | |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G31340 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G31340 |
GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT2G35635 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ) |