Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.8e-70 270.4 318 100.0
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 6.7e-70 268.5 318 99.7
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.7e-68 263.8 318 99.1
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.3e-60 237.7 318 93.7
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 2.2e-60 236.9 318 92.1
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 9.4e-48 194.9 318 89.3
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.6e-47 194.1 318 89.3
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 2.1e-47 193.7 316 79.7
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.0e-46 191.4 317 81.7
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 8.8e-46 188.3 314 84.1
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.5e-45 187.6 315 83.8
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 4.4e-45 186.0 314 69.4
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.2e-44 183.7 317 82.0
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 4.8e-44 182.6 317 82.0
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.4e-43 181.0 317 81.1
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.4e-43 181.0 315 76.2
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.8e-43 180.6 315 81.3
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 1.6e-42 177.6 316 79.7
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.0e-42 177.2 315 78.1
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 2.7e-42 176.8 314 78.0
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 4.5e-42 176.0 317 80.8
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.0e-41 174.9 317 63.7
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.0e-41 174.9 315 80.6
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.0e-41 174.9 316 80.7
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.3e-41 174.5 317 79.2
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 2.2e-41 173.7 316 82.9
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 3.8e-41 172.9 317 80.4
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 6.5e-41 172.2 317 80.8
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 6.5e-41 172.2 317 80.8
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 8.5e-41 171.8 315 82.2
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 1.1e-40 171.4 315 80.6
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.5e-40 171.0 316 80.7
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.5e-40 171.0 316 81.3
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.2e-40 169.9 316 80.7
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 5.5e-40 169.1 316 77.8
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 5.5e-40 169.1 315 81.3
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 9.4e-40 168.3 316 77.8
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 1.2e-39 167.9 316 77.5
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.2e-39 167.9 317 79.2
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.2e-39 167.9 316 75.9
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 1.2e-39 167.9 317 80.4
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 1.6e-39 167.5 315 78.4
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 2.1e-39 167.2 317 79.2
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 2.7e-39 166.8 316 72.5
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 3.6e-39 166.4 317 76.3
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 4.7e-39 166.0 317 81.7
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 6.1e-39 165.6 317 76.3
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 8.0e-39 165.2 314 79.0
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.0e-38 164.9 317 75.7
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.8e-38 164.1 317 80.4
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.8e-38 164.1 316 74.7
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 2.3e-38 163.7 317 77.9
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 2.3e-38 163.7 317 77.9
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.3e-38 163.7 316 71.5
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 2.3e-38 163.7 316 78.2
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 3.0e-38 163.3 312 82.1
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 4.0e-38 162.9 317 74.8
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 4.0e-38 162.9 317 76.0
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 5.2e-38 162.5 316 78.2
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 6.8e-38 162.2 317 80.1
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 1.5e-37 161.0 313 79.2
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.0e-37 160.6 316 77.2
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 4.4e-37 159.5 316 77.5
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 5.7e-37 159.1 317 76.7
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 9.8e-37 158.3 314 79.3
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.2e-36 157.1 315 74.9
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.8e-36 156.8 314 77.1
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 4.8e-36 156.0 316 70.9
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.3e-36 155.6 314 76.8
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.4e-35 153.7 317 77.3
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.4e-35 153.7 316 71.8
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 4.5e-34 149.4 314 76.1
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.7e-33 147.5 310 77.1
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.3e-33 147.1 315 72.7
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 2.9e-33 146.7 313 77.6
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 3.8e-33 146.4 315 77.5
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 5.0e-33 146.0 358 62.3
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 5.5e-32 142.5 317 77.3
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 8.0e-31 138.7 317 69.4
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 1.8e-30 137.5 318 66.7
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 6.8e-30 135.6 316 43.7
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 5.7e-29 132.5 317 65.3
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.7e-28 131.0 317 70.3
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 6.3e-28 129.0 316 64.2
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.8e-27 127.5 316 63.9
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 1.8e-27 127.5 315 54.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.4e-27 127.1 316 70.9
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 5.4e-27 125.9 315 64.1
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.7e-26 123.6 316 64.9
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 2.7e-26 123.6 74 74.3
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.7e-26 123.6 75 76.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 3.5e-26 123.2 315 64.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 5.9e-26 122.5 75 73.3
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.3e-25 121.3 67 83.6
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 2.3e-25 120.6 318 68.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 2.3e-25 120.6 318 68.2
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 6.6e-25 119.0 318 68.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 8.6e-25 118.6 318 68.2
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 8.6e-25 118.6 280 79.6
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.9e-24 117.5 74 67.6
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.8e-23 113.6 297 75.1
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.4e-21 106.7 64 76.6
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.2e-20 104.0 77 62.3
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.2e-18 98.2 309 42.4
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 1.6e-18 97.8 316 58.9
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.6e-17 92.0 59 69.5
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.9e-16 90.9 278 74.8
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 3.3e-16 90.1 57 68.4
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.3e-16 89.7 278 73.7
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.5e-13 81.3 60 56.7
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 2.6e-13 80.5 58 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.1e-11 73.2 74 45.9
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.0e-09 68.6 75 45.3
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.3e-08 63.2 40 67.5
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.1e-06 58.5 59 47.5
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 4.0e-06 56.6 58 44.8
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 4.0e-06 56.6 42 57.1
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 6.8e-06 55.8 59 40.7
SMO353G0202 Selaginella moellendorffii HOM05D006835 ORTHO05D001299 6.8e-06 55.8 59 49.2


User provided reference genes

Program Settings