Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 8.0e-283 976.5 507 100.0
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 2.7e-262 908.3 481 97.5
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 6.2e-235 817.4 481 89.0
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.5e-228 796.2 477 85.3
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 9.6e-212 740.3 395 98.0
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.6e-182 643.3 491 68.6
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 9.4e-175 617.5 492 66.1
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 5.1e-173 611.7 495 66.1
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.1e-170 604.0 481 65.3
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.8e-170 603.2 482 65.4
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 2.4e-170 602.8 482 65.8
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 2.9e-168 595.9 483 65.0
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 1.8e-165 586.6 490 64.7
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 3.0e-165 585.9 491 65.0
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 8.8e-165 584.3 491 65.4
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 1.5e-164 583.6 484 63.6
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 8.2e-163 577.8 482 62.7
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.4e-162 577.0 484 63.8
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 3.1e-162 575.9 483 63.8
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.1e-162 575.9 483 63.8
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.1e-162 575.9 483 63.8
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 4.1e-162 575.5 482 63.7
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 4.1e-162 575.5 481 64.0
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.3e-162 575.1 483 63.8
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 7.0e-162 574.7 482 63.7
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 7.0e-162 574.7 481 64.0
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 9.1e-162 574.3 485 62.7
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 1.6e-161 573.5 483 64.6
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 4.5e-161 572.0 481 61.7
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 4.5e-161 572.0 482 63.3
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.0e-160 570.9 483 63.1
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 8.5e-160 567.8 483 61.9
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 5.5e-159 565.1 482 62.4
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.2e-158 563.9 483 62.7
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 2.1e-158 563.1 499 62.3
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 2.7e-158 562.8 511 58.9
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 4.7e-158 562.0 487 62.2
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 4.7e-158 562.0 484 63.2
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 5.2e-157 558.5 481 62.0
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 2.6e-156 556.2 481 62.2
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 9.7e-156 554.3 481 60.1
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.7e-155 553.5 409 69.9
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 2.2e-155 553.1 484 60.3
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.2e-155 553.1 482 60.8
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 2.8e-155 552.7 491 61.3
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 3.7e-155 552.4 482 61.0
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 8.3e-155 551.2 493 61.5
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 3.1e-154 549.3 482 61.0
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.1e-154 548.9 485 61.6
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 5.9e-153 545.0 482 61.4
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 5.0e-152 542.0 489 62.4
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 1.1e-151 540.8 481 59.9
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.5e-151 540.4 493 57.6
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.9e-151 540.0 483 57.8
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 4.2e-151 538.9 490 57.3
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 4.2e-151 538.9 485 59.6
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 2.1e-150 536.6 482 60.8
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 6.1e-150 535.0 505 57.6
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.0e-149 534.3 481 59.5
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 1.8e-149 533.5 487 57.1
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 2.3e-149 533.1 493 57.6
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 2.3e-149 533.1 498 56.0
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 4.0e-149 532.3 482 60.8
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 1.2e-148 530.8 482 60.2
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 2.6e-148 529.6 494 57.9
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 3.4e-148 529.3 482 59.1
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 5.7e-148 528.5 482 57.1
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 7.5e-148 528.1 482 59.5
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 9.8e-148 527.7 483 59.4
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 2.2e-147 526.6 497 56.5
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 4.9e-147 525.4 484 57.2
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.6e-145 520.4 493 58.0
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 4.5e-145 518.8 487 56.5
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 4.5e-145 518.8 394 69.3
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 1.0e-144 517.7 487 56.3
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 5.0e-144 515.4 482 59.8
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 8.0e-142 508.1 483 58.4
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 1.2e-140 504.2 484 58.3
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.5e-140 503.8 482 58.1
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 5.4e-138 495.4 575 49.9
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 3.9e-136 489.2 478 55.0
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.6e-134 483.8 460 55.0
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 1.4e-133 480.7 496 53.6
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 3.1e-133 479.6 486 53.1
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 8.9e-133 478.0 489 53.6
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 3.7e-131 472.6 498 53.2
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 4.9e-131 472.2 405 62.0
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.1e-130 471.1 502 52.8
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 1.1e-130 471.1 502 52.8
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 4.1e-130 469.2 486 52.7
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 1.0e-128 464.5 499 52.1
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.7e-128 463.8 499 51.9
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 1.6e-126 457.2 488 51.2
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 2.1e-126 456.8 459 54.5
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 8.1e-126 454.9 485 51.5
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 4.0e-125 452.6 471 53.3
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 7.1e-122 441.8 483 51.6
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 3.5e-121 439.5 485 48.9
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 1.1e-117 427.9 497 50.7
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 2.9e-115 419.9 491 49.1
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 3.1e-101 373.2 488 44.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 6.9e-101 372.1 498 44.8
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 8.4e-99 365.2 485 43.5
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 1.0e-96 358.2 501 44.7
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 3.0e-96 356.7 476 47.1
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 4.3e-95 352.8 309 56.6
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.3e-87 326.2 464 40.3
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 7.6e-84 315.5 276 60.5
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.1e-71 275.0 171 88.3
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.3e-69 266.2 171 85.4
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 6.5e-59 232.6 489 32.7
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.4e-58 231.5 465 32.5
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 3.7e-54 216.9 480 30.4
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.5e-50 204.1 321 42.1
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 1.6e-49 201.4 175 60.6
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.0e-40 172.2 218 47.2
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 4.8e-38 163.3 218 48.6
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 3.6e-33 147.1 194 41.8
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 7.3e-18 96.3 546 23.8
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 2.6e-15 87.8 77 61.0


User provided reference genes

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