Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020160.2 Solanum lycopersicum HOM05D005539 ORTHO05D006644 5.5e-89 330.9 158 100.0
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 2.0e-75 285.8 140 97.9
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.2e-53 212.6 159 68.6
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.1e-52 210.3 159 70.4
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.0e-50 203.8 126 79.4
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 9.4e-49 197.2 155 67.7
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 3.4e-46 188.7 166 60.8
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 4.1e-44 181.8 148 60.8
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 7.0e-44 181.0 148 58.8
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.0e-43 179.5 97 88.7
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 3.5e-43 178.7 148 61.5
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 3.5e-43 178.7 170 56.5
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 1.0e-42 177.2 172 54.7
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 1.0e-42 177.2 155 58.1
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 1.3e-42 176.8 148 60.1
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 2.9e-42 175.6 131 66.4
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 2.9e-42 175.6 154 59.7
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 6.5e-42 174.5 150 60.0
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 6.5e-42 174.5 154 59.7
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 6.5e-42 174.5 149 57.0
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.1e-41 173.7 149 57.7
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.9e-41 172.9 150 58.7
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.9e-41 172.9 153 57.5
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 3.2e-41 172.2 134 62.7
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 4.2e-41 171.8 161 55.3
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 7.2e-41 171.0 140 65.0
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 2.7e-40 169.1 151 59.6
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 4.7e-40 168.3 147 55.8
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.7e-40 168.3 147 57.1
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 8.0e-40 167.5 126 62.7
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.0e-39 167.2 148 56.8
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 1.8e-39 166.4 130 63.1
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 1.8e-39 166.4 148 55.4
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.8e-39 166.4 148 55.4
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.8e-39 166.4 148 55.4
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 2.3e-39 166.0 143 58.7
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 2.3e-39 166.0 140 57.9
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 6.8e-39 164.5 157 52.9
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 8.8e-39 164.1 137 57.7
Hma1.2p1_0703F.1_g206520 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 8.8e-39 164.1 130 60.8
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 8.8e-39 164.1 130 60.8
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 5.7e-38 161.4 153 54.9
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 7.5e-38 161.0 155 53.5
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.3e-37 160.2 126 60.3
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 1.7e-37 159.8 147 58.5
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 1.7e-37 159.8 153 54.9
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.7e-37 159.8 147 55.1
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.7e-37 159.8 138 59.4
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 2.8e-37 159.1 150 54.0
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 3.7e-37 158.7 148 57.4
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 4.9e-37 158.3 147 53.1
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 1.1e-36 157.1 154 56.5
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 1.4e-36 156.8 147 52.4
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.4e-36 156.8 149 51.7
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.8e-36 156.4 126 59.5
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.8e-36 156.4 131 59.5
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 2.4e-36 156.0 126 59.5
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 3.1e-36 155.6 148 56.8
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 4.1e-36 155.2 158 48.1
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 5.4e-36 154.8 155 56.1
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 5.4e-36 154.8 142 55.6
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 9.2e-36 154.1 138 56.5
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.2e-35 153.7 158 48.7
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 1.6e-35 153.3 159 47.2
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 2.0e-35 152.9 129 58.1
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 2.0e-35 152.9 136 55.9
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 2.0e-35 152.9 126 58.7
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 2.7e-35 152.5 147 50.3
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 2.7e-35 152.5 132 57.6
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 3.5e-35 152.1 126 57.9
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 3.5e-35 152.1 147 51.0
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 4.5e-35 151.8 147 49.7
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 4.5e-35 151.8 127 57.5
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 4.5e-35 151.8 130 59.2
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 7.7e-35 151.0 166 49.4
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 1.0e-34 150.6 130 57.7
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 1.0e-34 150.6 147 51.0
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.7e-34 149.8 147 52.4
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.7e-34 149.8 142 51.4
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 2.9e-34 149.1 127 57.5
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 3.8e-34 148.7 161 49.7
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 5.0e-34 148.3 142 52.1
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 8.6e-34 147.5 136 55.1
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 1.9e-33 146.4 126 57.9
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 3.3e-33 145.6 141 50.4
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 4.3e-33 145.2 126 55.6
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 4.3e-33 145.2 127 55.1
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.8e-32 142.5 138 52.9
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 2.3e-31 139.4 144 53.5
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 6.8e-31 137.9 125 52.8
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 6.8e-31 137.9 127 55.9
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 5.7e-30 134.8 171 46.2
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 2.7e-27 125.9 96 59.4
MD07G1221200 Malus domestica HOM05D005539 ORTHO05D006644 8.6e-26 120.9 151 48.3
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 5.8e-22 108.2 109 50.5
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 9.8e-22 107.5 127 45.7
SHI03444 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-18 96.7 106 46.2
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 2.1e-16 89.7 141 36.9
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 5.2e-15 85.1 72 61.1
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 6.8e-15 84.7 138 38.4
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.4e-14 82.0 151 31.8
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 4.4e-14 82.0 151 31.8
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.3e-10 70.5 144 36.8


User provided reference genes

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