Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008460.1 Solanum lycopersicum HOM05D003241 ORTHO05D003812 1.5e-106 390.6 405 100.0
Sopen11g004250 Solanum pennellii HOM05D003241 ORTHO05D003812 1.7e-94 350.5 404 91.1
PGSC0003DMG400007426 Solanum tuberosum HOM05D003241 ORTHO05D003812 1.1e-90 337.8 404 87.9
Nitab4.5_0004385g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 6.7e-75 285.4 182 87.4
Nitab4.5_0004325g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 2.8e-73 280.0 182 85.7
CAN.G321.38 Capsicum annuum HOM05D003241 ORTHO05D003812 6.5e-70 268.9 171 86.0
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 3.7e-65 253.1 182 79.1
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 1.9e-53 214.2 174 68.4
Nn5g27739 Nelumbo nucifera HOM05D003241 ORTHO05D003812 5.6e-53 212.6 182 65.4
Lj2A813G14 Lonicera japonica HOM05D003241 ORTHO05D003812 1.2e-52 211.5 173 69.4
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 1.2e-52 211.5 171 71.3
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 1.6e-52 211.1 176 67.6
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 4.7e-52 209.5 169 68.0
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 6.1e-52 209.1 159 73.0
CiPaw.02G097400 Carya illinoinensis HOM05D003241 ORTHO05D003812 1.8e-51 207.6 179 64.2
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 5.2e-51 206.1 183 62.8
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 5.2e-51 206.1 183 62.8
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 5.2e-51 206.1 183 62.8
FAN27G2894 Fragaria x ananassa HOM05D003241 ORTHO05D003812 6.8e-51 205.7 166 70.5
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 6.8e-51 205.7 170 68.2
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 8.9e-51 205.3 184 63.6
Cfa015650 Carpinus fangiana HOM05D003241 ORTHO05D003812 1.2e-50 204.9 146 75.3
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 1.2e-50 204.9 146 75.3
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 2.0e-50 204.1 175 67.4
FAN15G1779 Fragaria x ananassa HOM05D003241 ORTHO05D003812 2.6e-50 203.8 166 69.9
FAN20G2531 Fragaria x ananassa HOM05D003241 ORTHO05D003812 2.6e-50 203.8 166 69.9
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 2.6e-50 203.8 168 69.6
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 2.6e-50 203.8 168 69.6
FAN12G3728 Fragaria x ananassa HOM05D003241 ORTHO05D003812 3.4e-50 203.4 166 69.9
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 9.8e-50 201.8 150 73.3
FvH4_4g15641 Fragaria vesca HOM05D003241 ORTHO05D003812 1.7e-49 201.1 166 69.3
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 1.7e-49 201.1 150 73.3
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 2.2e-49 200.7 184 62.0
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 2.2e-49 200.7 176 63.6
TWI32G0731 Tripterygium wilfordii HOM05D003241 ORTHO05D003812 2.9e-49 200.3 154 68.2
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 4.9e-49 199.5 173 66.5
FAN17G1371 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.9e-49 199.5 166 68.7
MD16G1194300 Malus domestica HOM05D003241 ORTHO05D003812 4.9e-49 199.5 170 64.7
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 1.4e-48 198.0 170 67.1
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 1.9e-48 197.6 158 70.3
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 2.4e-48 197.2 170 65.9
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 2.4e-48 197.2 184 60.9
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 4.1e-48 196.4 184 61.4
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 5.4e-48 196.1 183 60.7
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 7.0e-48 195.7 162 64.8
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 7.0e-48 195.7 157 66.9
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 9.2e-48 195.3 183 60.7
QL06p002249 Quercus lobata HOM05D003241 ORTHO05D003812 9.2e-48 195.3 179 63.1
QL06p002393 Quercus lobata HOM05D003241 ORTHO05D003812 9.2e-48 195.3 179 63.1
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 2.0e-47 194.1 161 68.9
FAN22G0104 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.6e-47 193.0 173 66.5
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 7.8e-47 192.2 164 65.9
PSO339G6261 Papaver somniferum HOM05D003241 ORTHO05D003812 1.3e-46 191.4 167 64.1
Migut.J00827 Erythranthe guttata HOM05D003241 ORTHO05D003812 2.3e-46 190.7 150 69.3
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 2.3e-46 190.7 175 60.6
PSO013G0353 Papaver somniferum HOM05D003241 ORTHO05D003812 2.3e-46 190.7 178 61.8
PSO063G3239 Papaver somniferum HOM05D003241 ORTHO05D003812 2.3e-46 190.7 172 62.2
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 1.1e-45 188.3 157 67.5
Eucgr.L01432 Eucalyptus grandis HOM05D003241 ORTHO05D003812 1.5e-45 188.0 175 60.0
PSO339G1389 Papaver somniferum HOM05D003241 ORTHO05D003812 1.5e-45 188.0 168 64.3
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 1.5e-45 188.0 170 64.7
unitig_77.g31483 Utricularia gibba HOM05D003241 ORTHO05D003812 2.5e-45 187.2 157 66.9
PGR031G3475 Punica granatum HOM05D003241 ORTHO05D003812 4.3e-45 186.4 169 63.3
Cpa.g.sc115.47 Carica papaya HOM05D003241 ORTHO05D003812 9.5e-45 185.3 175 62.3
SEGI_01763 Sequoiadendron giganteum HOM05D003241 ORTHO05D003812 1.2e-44 184.9 147 66.7
ATR1098G045 Amborella trichopoda HOM05D003241 ORTHO05D003812 2.8e-44 183.7 161 62.7
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 8.0e-44 182.2 190 57.9
CDE06G2045 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 1.1e-43 181.8 185 56.8
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 2.3e-43 180.6 186 57.5
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 2.3e-43 180.6 175 58.9
Sp6g27340 Schrenkiella parvula HOM05D003241 ORTHO05D003812 4.0e-43 179.9 159 65.4
ClCG08G000520 Citrullus lanatus HOM05D003241 ORTHO05D003812 6.8e-43 179.1 156 67.3
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 1.2e-42 178.3 170 61.2
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 1.5e-42 177.9 188 56.4
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 1.5e-42 177.9 144 67.4
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 2.6e-42 177.2 157 63.7
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 3.4e-42 176.8 154 64.3
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 4.4e-42 176.4 180 56.7
Glyma.08G229600 Glycine max HOM05D003241 ORTHO05D003812 4.4e-42 176.4 181 57.5
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 1.3e-41 174.9 169 61.5
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea HOM05D003241 ORTHO05D003812 2.2e-41 174.1 178 56.7
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 2.2e-41 174.1 166 61.4
BcaC04g18847 Brassica carinata HOM05D003241 ORTHO05D003812 2.9e-41 173.7 166 61.4
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 2.9e-41 173.7 181 57.5
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea HOM05D003241 ORTHO05D003812 3.7e-41 173.3 160 60.0
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 3.7e-41 173.3 168 61.9
AUR62018246 Chenopodium quinoa HOM05D003241 ORTHO05D003812 3.7e-41 173.3 187 55.1
Ca_13374_v3 Cicer arietinum L. HOM05D003241 ORTHO05D003812 4.9e-41 172.9 178 57.9
Glyma.07G220800 Glycine max HOM05D003241 ORTHO05D003812 4.9e-41 172.9 181 56.9
MELO3C022204.2 Cucumis melo HOM05D003241 ORTHO05D003812 6.4e-41 172.6 181 59.7
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 8.3e-41 172.2 166 61.4
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 8.3e-41 172.2 167 60.5
Lalb_Chr19g0130441 Lupinus albus HOM05D003241 ORTHO05D003812 8.3e-41 172.2 168 59.5
CsaV3_5G040300 Cucumis sativus L. HOM05D003241 ORTHO05D003812 1.9e-40 171.0 180 58.9
Lalb_Chr03g0032261 Lupinus albus HOM05D003241 ORTHO05D003812 2.4e-40 170.6 162 60.5
QL11p041824 Quercus lobata HOM05D003241 ORTHO05D003812 3.2e-40 170.2 139 66.9
ECA248G0833 Erigeron canadensis HOM05D003241 ORTHO05D003812 2.7e-39 167.2 174 58.6
Psat0s3089g0040 Pisum sativum HOM05D003241 ORTHO05D003812 2.7e-39 167.2 178 56.7
VMungo1127G0135 Vigna mungo HOM05D003241 ORTHO05D003812 6.0e-39 166.0 136 68.4
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 3.0e-38 163.7 136 67.6
Medtr1g083910 Medicago truncatula HOM05D003241 ORTHO05D003812 5.1e-38 162.9 178 55.1
HPP92_003413 Vanilla planifolia HOM05D003241 ORTHO05D008621 6.6e-38 162.5 150 58.7
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 8.6e-38 162.2 174 56.3
Sc22g0003580 Simmondsia chinensis HOM05D003241 ORTHO05D003812 1.1e-37 161.8 172 57.6
QL06p040345 Quercus lobata HOM05D003241 ORTHO05D003812 3.3e-37 160.2 165 57.6
Zm00001eb140630 Zea mays HOM05D003241 ORTHO05D003812 2.1e-36 157.5 159 58.5
QL09p049197 Quercus lobata HOM05D003241 ORTHO05D003812 1.7e-33 147.9 159 56.0
QL04p053119 Quercus lobata HOM05D003241 ORTHO05D003812 4.1e-32 143.3 121 64.5
TPR.G2613 Trifolium pratense HOM05D003241 ORTHO05D003812 4.1e-32 143.3 220 45.5
ECA248G0244 Erigeron canadensis HOM05D003241 ORTHO05D003812 2.1e-31 141.0 169 51.5
vmacro00335 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 6.0e-31 139.4 169 53.8
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 6.6e-30 136.0 161 50.3
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 8.6e-30 135.6 157 51.0
Mapoly0063s0006 Marchantia polymorpha HOM05D003241 ORTHO05D003812 1.9e-29 134.4 162 50.0
Medtr1g032020 Medicago truncatula HOM05D003241 ORTHO05D003812 2.1e-28 131.0 160 52.5
Medtr1g032350 Medicago truncatula HOM05D003241 ORTHO05D003812 2.1e-28 131.0 160 52.5
Haze_07845 Corylus avellana HOM05D003241 ORTHO05D003812 2.2e-25 120.9 115 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1153__1154 Anthoceros agrestis HOM05D003241 ORTHO05D003812 2.4e-24 117.5 143 49.7
QL09p049206 Quercus lobata HOM05D003241 ORTHO05D003812 9.2e-24 115.5 69 79.7
Actinidia38515 Actinidia chinensis HOM05D003241 ORTHO05D003812 1.2e-23 115.2 71 78.9
CBR_g32002 Chara braunii HOM05D003241 ORTHO05D003812 6.0e-23 112.8 160 45.6
Pp3c15_10170 Physcomitrium patens HOM05D003241 ORTHO05D003812 1.7e-22 111.3 128 48.4
unitig_749.g14191 Utricularia gibba HOM05D003241 ORTHO05D003812 3.0e-22 110.5 136 52.2
TPR.G37958 Trifolium pratense HOM05D003241 ORTHO05D003812 5.1e-22 109.8 137 54.7
SMO361G0171 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 2.6e-18 97.4 129 44.2
SHI33105 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-17 94.4 64 70.3
Sopen06g019980 Solanum pennellii HOM05D003241 ORTHO05D003812 4.9e-17 93.2 47 97.9
COL.COLO4_13873 Corchorus olitorius HOM05D003241 ORTHO05D003812 1.4e-16 91.7 115 48.7
Glyma.15G216300 Glycine max HOM05D003241 ORTHO05D003812 3.5e-15 87.0 57 77.2
QL05p063869 Quercus lobata HOM05D003241 ORTHO05D003812 4.3e-13 80.1 117 46.2
Lj2C819G2 Lonicera japonica HOM05D003241 ORTHO05D003812 6.2e-12 76.3 52 82.7
RcHm_v2.0_Chr1g0362531 Rosa chinensis HOM05D003241 ORTHO05D025469 1.3e-09 68.6 50 74.0
AagrBONN_evm.TU.Sc2ySwM_117.3514 Anthoceros agrestis HOM05D003241 ORTHO05D003812 1.1e-08 65.5 62 56.5
MCO08G320 Micromonas commoda HOM05D003241 ORTHO05D003812 6.0e-07 59.7 82 42.7
Lju445A0T12 Lonicera japonica HOM05D003241 ORTHO05D003812 7.9e-07 59.3 55 54.5
Lj1A444T9 Lonicera japonica HOM05D003241 ORTHO05D003812 1.8e-06 58.2 55 52.7
MBI14_g36867_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 8.7e-06 55.8 34 79.4
RcHm_v2.0_Chr1g0362541 Rosa chinensis HOM05D003241 ORTHO05D003812 8.7e-06 55.8 31 83.9


User provided reference genes

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