Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g055030.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.3e-47 193.0 114 100.0
Solyc10g055070.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.0e-13 77.8 61 67.2
Sopen10g024960 Solanum pennellii HOM05D001514 ORTHO05D005209 1.8e-12 76.3 61 65.6
Solyc10g055130.2 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.3e-12 75.9 61 62.3
PGSC0003DMG400003348 Solanum tuberosum HOM05D001514 ORTHO05D005209 3.0e-12 75.5 61 65.6
Sopen10g024890 Solanum pennellii HOM05D001514 ORTHO05D005209 6.7e-12 74.3 61 63.9
Solyc10g054950.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.1e-11 73.6 61 63.9
Solyc10g055020.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.1e-11 73.6 61 63.9
Solyc10g049510.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.5e-11 73.2 61 62.3
PGSC0003DMG400040125 Solanum tuberosum HOM05D001514 ORTHO05D005209 3.3e-11 72.0 49 73.5
CAN.G1963.7 Capsicum annuum HOM05D001514 ORTHO05D005209 7.4e-11 70.9 49 69.4
Sopen10g024920 Solanum pennellii HOM05D001514 ORTHO05D005209 7.4e-11 70.9 61 62.3
Solyc10g054980.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 9.6e-11 70.5 64 57.8
PGSC0003DMG400027872 Solanum tuberosum HOM05D001514 ORTHO05D005209 9.6e-11 70.5 61 60.7
Sopen12g004040 Solanum pennellii HOM05D001514 ORTHO05D005209 4.8e-10 68.2 49 67.3
Solyc12g062270.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 8.1e-10 67.4 46 71.7
Solyc12g009090.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.4e-09 66.6 49 65.3
PGSC0003DMG400000323 Solanum tuberosum HOM05D001514 ORTHO05D005209 1.4e-09 66.6 49 65.3
CAN.G299.3 Capsicum annuum HOM05D001514 ORTHO05D005209 4.0e-09 65.1 49 63.3
Cc06_g12020 Coffea canephora HOM05D001514 ORTHO05D005209 6.9e-09 64.3 49 61.2
Nitab4.5_0001866g0080 Nicotiana tabacum HOM05D001514 ORTHO05D005209 6.9e-09 64.3 49 63.3
Sopen12g011120 Solanum pennellii HOM05D001514 ORTHO05D005209 6.9e-09 64.3 61 52.5
MSTRG.6002 Avicennia marina HOM05D001514 ORTHO05D005209 9.0e-09 63.9 49 59.2
Solyc10g055150.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 9.0e-09 63.9 61 59.0
Lsat_1_v5_gn_7_35041 Lactuca sativa HOM05D001514 ORTHO05D005209 1.5e-08 63.2 49 63.3
Solyc05g041170.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.0e-08 62.8 76 44.7
Solyc10g055160.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.0e-08 62.8 43 72.1
SGA_v2.0_scaffold97G29140 Striga asiatica HOM05D001514 ORTHO05D005209 3.4e-08 62.0 48 60.4
Solyc10g049550.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.8e-08 61.2 61 55.7
Nitab4.5_0000073g0250 Nicotiana tabacum HOM05D001514 ORTHO05D005209 9.9e-08 60.5 49 59.2
HanXRQChr09g0237811 Helianthus annuus HOM05D001514 ORTHO05D005209 1.7e-07 59.7 49 59.2
Nitab4.5_0011363g0010 Nicotiana tabacum HOM05D001514 ORTHO05D005209 1.7e-07 59.7 49 59.2
Peaxi162Scf00928g00034 Petunia axillaris HOM05D001514 ORTHO05D005209 1.7e-07 59.7 48 58.3
ECA233G5402 Erigeron canadensis HOM05D001514 ORTHO05D005209 4.9e-07 58.2 49 57.1
Migut.J00937 Erythranthe guttata HOM05D001514 ORTHO05D005209 8.4e-07 57.4 49 53.1
Dinv42376 Davidia involucrata HOM05D001514 ORTHO05D005209 1.9e-06 56.2 49 59.2
Eucgr.C00825 Eucalyptus grandis HOM05D001514 ORTHO05D005209 2.4e-06 55.8 49 59.2
SalBow6G1458 Salvia bowleyana HOM05D001514 ORTHO05D005209 2.4e-06 55.8 78 42.3
Sopen10g024880 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-06 55.8 27 92.6
Solyc10g055100.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.2e-06 55.5 61 55.7
unitig_749.g14240 Utricularia gibba HOM05D001514 ORTHO05D005209 4.2e-06 55.1 71 39.4
SalBow3G1655 Salvia bowleyana HOM05D001514 ORTHO05D005209 5.5e-06 54.7 78 41.0
CSS0005970 Camellia sinensis var. sinensis HOM05D001514 ORTHO05D005209 9.3e-06 53.9 51 54.9


User provided reference genes

Program Settings