Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g024380.1 Solanum lycopersicum HOM05D000461 ORTHO05D391867 4.5e-24 113.6 52 100.0
Sopen05g034030 Solanum pennellii HOM05D000461 ORTHO05D001829 5.4e-09 63.5 54 59.3
CAN.G321.59 Capsicum annuum HOM05D000461 ORTHO05D001829 7.0e-09 63.2 54 59.3
CDE10G1212 Ceratophyllum demersum HOM05D000461 ORTHO05D001829 7.0e-09 63.2 54 59.3
Nitab4.5_0001450g0110 Nicotiana tabacum HOM05D000461 ORTHO05D001829 7.0e-09 63.2 54 59.3
Nitab4.5_0006187g0050 Nicotiana tabacum HOM05D000461 ORTHO05D001829 7.0e-09 63.2 54 59.3
Sopen05g034040 Solanum pennellii HOM05D000461 ORTHO05D001829 9.1e-09 62.8 54 59.3
PGSC0003DMG402023368 Solanum tuberosum HOM05D000461 ORTHO05D001829 9.1e-09 62.8 54 59.3
Cc02_g10900 Coffea canephora HOM05D000461 ORTHO05D001829 1.2e-08 62.4 54 57.4
Dinv31235 Davidia involucrata HOM05D000461 ORTHO05D001829 1.2e-08 62.4 54 59.3
Actinidia38869 Actinidia chinensis HOM05D000461 ORTHO05D001829 1.6e-08 62.0 54 59.3
MBI11_g42353_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D001829 1.6e-08 62.0 54 59.3
Nitab4.5_0000096g0320 Nicotiana tabacum HOM05D000461 ORTHO05D001829 1.6e-08 62.0 54 59.3
Nitab4.5_0001760g0050 Nicotiana tabacum HOM05D000461 ORTHO05D001829 1.6e-08 62.0 54 59.3
TAR623G0154 Trochodendron aralioides HOM05D000461 ORTHO05D001829 2.0e-08 61.6 54 57.4
Sopen02g011460 Solanum pennellii HOM05D000461 ORTHO05D001829 2.7e-08 61.2 54 57.4
Solyc11g008320.3 Solanum lycopersicum HOM05D000461 ORTHO05D001829 4.5e-08 60.5 54 59.3
PGSC0003DMG400007432 Solanum tuberosum HOM05D000461 ORTHO05D001829 4.5e-08 60.5 54 59.3
PGSC0003DMG400023479 Solanum tuberosum HOM05D000461 ORTHO05D001829 4.5e-08 60.5 54 57.4
CSS0003817 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D001829 5.9e-08 60.1 54 57.4
CSS0021786 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D001829 5.9e-08 60.1 54 57.4
ATR0589G050 Amborella trichopoda HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 57.4
AUR62020695 Chenopodium quinoa HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 55.6
Dinv36390 Davidia involucrata HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 59.3
Hma1.2p1_0145F.1_g065380 Hydrangea macrophylla HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 57.4
Hma1.2p1_2705F.1_g327180 Hydrangea macrophylla HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 57.4
Solyc05g055590.2 Solanum lycopersicum HOM05D000461 ORTHO05D001829 7.7e-08 59.7 54 55.6
DCAR_006413 Daucus carota HOM05D000461 ORTHO05D001829 1.0e-07 59.3 54 55.6
Peaxi162Scf00176g01518 Petunia axillaris HOM05D000461 ORTHO05D001829 1.0e-07 59.3 54 55.6
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.0e-07 59.3 54 57.4
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.0e-07 59.3 54 57.4
EL10Ac2g03654 Beta vulgaris HOM05D000461 ORTHO05D001829 1.3e-07 58.9 54 57.4
ECA233G3538 Erigeron canadensis HOM05D000461 ORTHO05D001829 1.3e-07 58.9 54 53.7
Hund08931 Selenicereus undatus HOM05D000461 ORTHO05D001829 1.3e-07 58.9 54 57.4
Sopen11g004130 Solanum pennellii HOM05D000461 ORTHO05D001829 1.3e-07 58.9 54 57.4
AUR62028030 Chenopodium quinoa HOM05D000461 ORTHO05D001829 1.7e-07 58.5 54 53.7
ATR0589G007 Amborella trichopoda HOM05D000461 ORTHO05D001829 2.9e-07 57.8 54 55.6
Lsat_1_v5_gn_8_20820 Lactuca sativa HOM05D000461 ORTHO05D001829 2.9e-07 57.8 54 55.6
vmacro04841 Vaccinium macrocarpon HOM05D000461 ORTHO05D001829 2.9e-07 57.8 54 57.4
PGSC0003DMG400015107 Solanum tuberosum HOM05D000461 ORTHO05D020834 5.0e-07 57.0 43 65.1
Aqoxy1G01138 Aquilegia oxysepala HOM05D000461 ORTHO05D001829 8.5e-07 56.2 54 53.7
Sc06g0001650 Simmondsia chinensis HOM05D000461 ORTHO05D001829 8.5e-07 56.2 54 51.9
GSVIVG01016218001 Vitis vinifera HOM05D000461 ORTHO05D001829 8.5e-07 56.2 54 53.7
ClCG08G007730 Citrullus lanatus HOM05D000461 ORTHO05D001829 1.5e-06 55.5 55 54.5
SalBow4G1586 Salvia bowleyana HOM05D000461 ORTHO05D001829 1.5e-06 55.5 54 53.7
HanXRQChr08g0218521 Helianthus annuus HOM05D000461 ORTHO05D001829 1.9e-06 55.1 54 53.7
Eucgr.G02868 Eucalyptus grandis HOM05D000461 ORTHO05D001829 2.5e-06 54.7 55 54.5
PSO063G5841 Papaver somniferum HOM05D000461 ORTHO05D001829 2.5e-06 54.7 54 51.9
PGR142G1866 Punica granatum HOM05D000461 ORTHO05D001829 2.5e-06 54.7 55 54.5
Cfa001807 Carpinus fangiana HOM05D000461 ORTHO05D001829 3.2e-06 54.3 55 54.5
Haze_16741 Corylus avellana HOM05D000461 ORTHO05D001829 3.2e-06 54.3 55 54.5
PSO339G0701 Papaver somniferum HOM05D000461 ORTHO05D001829 3.2e-06 54.3 54 51.9
CsaV3_6G036720 Cucumis sativus L. HOM05D000461 ORTHO05D001829 5.5e-06 53.5 55 52.7
Lj2C21G5 Lonicera japonica HOM05D000461 ORTHO05D001829 7.2e-06 53.1 52 55.8
Os04g0560300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D001829 7.2e-06 53.1 54 46.3
Sed0015646 Sechium edule HOM05D000461 ORTHO05D001829 7.2e-06 53.1 55 52.7
QL08p054300 Quercus lobata HOM05D000461 ORTHO05D001829 9.5e-06 52.8 55 52.7


User provided reference genes

Program Settings