Gene: Sopen05g034040
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g034040
- Transcript Identifier Sopen05g034040.1
- Gene Type Coding gene
- Location Spenn-ch05 : 77225058-77227179 : negative
Gene Family Information
- ID HOM05D000461
- #Genes/#Species 1145/100
- Phylogenetic origin
- ID ORTHO05D001829
- #Genes/#Species 349/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g034040.1
Descriptions
- Description Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. | FLOWERING LOCUS D (FLD) | FUNCTIONS IN: primary amine oxidase activity | INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Amine oxidase , SWIRM | BEST Arabidopsis thaliana protein match is: LSD1-like 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.7.1 | Chromatin organisation.post-translational histone modification.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1) |