Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g042480.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 3.1e-78 295.0 149 100.0
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.2e-61 240.0 192 69.3
Solyc12g043070.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 2.0e-61 239.2 192 69.3
Sopen03g025600 Solanum pennellii HOM05D004933 ORTHO05D005465 7.8e-61 237.3 192 68.2
Solyc07g064540.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.7e-60 236.1 192 68.8
Nitab4.5_0006356g0020 Nicotiana tabacum HOM05D004933 ORTHO05D005465 6.2e-50 201.1 195 57.9
Nitab4.5_0000171g0280 Nicotiana tabacum HOM05D004933 ORTHO05D005465 1.4e-46 189.9 195 55.4
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 2.7e-45 185.7 195 54.4
Sopen10g016820 Solanum pennellii HOM05D004933 ORTHO05D005465 4.3e-43 178.3 155 65.2
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 3.0e-28 129.0 199 41.2
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 5.1e-28 128.3 199 41.2
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.4e-25 120.2 108 53.7
Oeu064001.1 Olea europaea HOM05D004933 ORTHO05D005465 1.8e-25 119.8 195 38.5
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.4e-25 119.4 108 52.8
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 9.0e-25 117.5 108 58.3
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 9.0e-25 117.5 108 54.6
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.2e-24 117.1 108 53.7
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 1.2e-24 117.1 108 53.7
COL.COLO4_19474 Corchorus olitorius HOM05D004933 ORTHO05D005465 2.0e-24 116.3 108 55.6
QL08p065080 Quercus lobata HOM05D004933 ORTHO05D005465 2.0e-24 116.3 109 54.1
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 4.4e-24 115.2 123 51.2
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.7e-23 113.2 129 46.5
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 2.2e-23 112.8 108 54.6
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 2.2e-23 112.8 191 38.7
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 3.8e-23 112.1 121 47.1
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 6.4e-23 111.3 108 54.6
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 8.4e-23 110.9 108 50.9
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 8.4e-23 110.9 108 51.9
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 1.1e-22 110.5 128 49.2
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 1.1e-22 110.5 196 38.3
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 4.2e-22 108.6 108 51.9
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 5.4e-22 108.2 107 53.3
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 5.4e-22 108.2 109 52.3
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 1.6e-21 106.7 108 50.0
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 2.7e-21 105.9 108 49.1
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 4.6e-21 105.1 104 53.8
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 4.6e-21 105.1 108 49.1
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 6.0e-21 104.8 110 50.9
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 1.0e-20 104.0 108 48.1
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 1.0e-20 104.0 108 48.1
VMungo0647G1932 Vigna mungo HOM05D004933 ORTHO05D005465 1.0e-20 104.0 108 49.1
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 1.3e-20 103.6 108 46.3
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 1.3e-20 103.6 109 48.6
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 1.7e-20 103.2 108 50.0
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 1.7e-20 103.2 108 50.0
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 3.0e-20 102.4 127 46.5
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 5.1e-20 101.7 108 49.1
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 5.1e-20 101.7 125 48.0
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 5.1e-20 101.7 109 46.8
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 1.1e-19 100.5 111 49.5
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 1.1e-19 100.5 126 44.4
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 1.5e-19 100.1 115 46.1
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.5e-19 100.1 111 48.6
FAN18G3827 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.5e-19 100.1 111 47.7
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 1.9e-19 99.8 107 49.5
FAN03G3286 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.9e-19 99.8 111 47.7
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 1.9e-19 99.8 108 47.2
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 3.3e-19 99.0 109 48.6
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 3.3e-19 99.0 117 46.2
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 5.6e-19 98.2 108 48.1
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 7.3e-19 97.8 111 46.8
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 9.6e-19 97.4 110 47.3
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 1.6e-18 96.7 194 35.6
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 2.1e-18 96.3 102 48.0
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 2.8e-18 95.9 117 41.9
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 4.8e-18 95.1 185 33.5
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 6.2e-18 94.7 125 43.2
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 6.2e-18 94.7 109 48.6
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 1.4e-17 93.6 100 48.0
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 5.3e-17 91.7 100 49.0
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 5.3e-17 91.7 111 41.4
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 6.9e-17 91.3 108 45.4
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 6.9e-17 91.3 112 44.6
AL4G34440 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 9.0e-17 90.9 108 46.3
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 9.0e-17 90.9 108 46.3
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 1.2e-16 90.5 108 46.3
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 5.8e-16 88.2 118 42.4
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 9.9e-16 87.4 197 33.5
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 1.7e-15 86.7 107 44.9
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 6.4e-15 84.7 129 40.3
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 2.4e-14 82.8 108 42.6
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 3.2e-14 82.4 109 38.5
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 7.1e-14 81.3 109 38.5
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 6.0e-13 78.2 102 46.1
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 7.9e-13 77.8 102 46.1
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 1.8e-12 76.6 102 45.1
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 6.7e-12 74.7 105 41.9
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 1.1e-11 73.9 117 40.2
BcaC02g12882 Brassica carinata HOM05D004933 ORTHO05D005465 1.5e-11 73.6 102 44.1
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 1.5e-11 73.6 102 44.1
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 1.6e-10 70.1 128 38.3
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 3.7e-10 68.9 58 56.9
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 1.1e-09 67.4 126 37.3
CDE04G3054 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 9.0e-09 64.3 114 36.0
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 2.6e-08 62.8 83 44.6
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 1.9e-06 56.6 116 37.1


User provided reference genes

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