Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g031590.4 Solanum lycopersicum HOM05D002814 ORTHO05D003303 1.7e-11 71.2 35 100.0
Sopen09g013970 Solanum pennellii HOM05D002814 ORTHO05D003303 1.7e-11 71.2 35 100.0
CAN.G3.31 Capsicum annuum HOM05D002814 ORTHO05D003303 3.3e-10 67.0 34 94.1
Oeu064676.1 Olea europaea HOM05D002814 ORTHO05D003303 3.1e-08 60.5 34 79.4
CARHR206020 Cardamine hirsuta HOM05D002814 ORTHO05D003303 2.0e-07 57.8 34 73.5
MELO3C020518.2 Cucumis melo HOM05D002814 ORTHO05D003303 2.0e-07 57.8 34 76.5
CsaV3_1G036500 Cucumis sativus L. HOM05D002814 ORTHO05D003303 2.0e-07 57.8 34 76.5
ClCG03G000420 Citrullus lanatus HOM05D002814 ORTHO05D003303 2.6e-07 57.4 34 76.5
Prupe.6G048200 Prunus persica HOM05D002814 ORTHO05D003303 2.6e-07 57.4 34 79.4
CSS0038883 Camellia sinensis var. sinensis HOM05D002814 ORTHO05D003303 3.4e-07 57.0 34 73.5
Aa31LG11G220 Aethionema arabicum HOM05D002814 ORTHO05D003303 5.8e-07 56.2 34 70.6
FvH4_3g39770 Fragaria vesca HOM05D002814 ORTHO05D003303 7.5e-07 55.8 34 76.5
FAN11G2249 Fragaria x ananassa HOM05D002814 ORTHO05D003303 7.5e-07 55.8 34 76.5
FAN16G3444 Fragaria x ananassa HOM05D002814 ORTHO05D003303 7.5e-07 55.8 34 76.5
FAN25G3323 Fragaria x ananassa HOM05D002814 ORTHO05D003303 7.5e-07 55.8 34 76.5
RcHm_v2.0_Chr5g0071651 Rosa chinensis HOM05D002814 ORTHO05D003303 7.5e-07 55.8 34 76.5
Actinidia32609 Actinidia chinensis HOM05D002814 ORTHO05D003303 9.8e-07 55.5 34 70.6
Carub.0006s0604 Capsella rubella HOM05D002814 ORTHO05D003303 9.8e-07 55.5 34 70.6
AL6G17300 Arabidopsis lyrata HOM05D002814 ORTHO05D003303 1.3e-06 55.1 34 70.6
Eucgr.B04005 Eucalyptus grandis HOM05D002814 ORTHO05D003303 1.3e-06 55.1 34 73.5
AL8G34630 Arabidopsis lyrata HOM05D002814 ORTHO05D003303 1.7e-06 54.7 33 69.7
AT5G58440 Arabidopsis thaliana HOM05D002814 ORTHO05D003303 1.7e-06 54.7 33 69.7
Cpa.g.sc2.354 Carica papaya HOM05D002814 ORTHO05D003303 1.7e-06 54.7 34 73.5
Cfa011779 Carpinus fangiana HOM05D002814 ORTHO05D003303 1.7e-06 54.7 34 70.6
Cc01_g14860 Coffea canephora HOM05D002814 ORTHO05D003303 1.7e-06 54.7 34 70.6
Sed0017047 Sechium edule HOM05D002814 ORTHO05D003303 1.7e-06 54.7 33 69.7
BcaB01g06033 Brassica carinata HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 67.6
A03p03100 Brassica napus HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 67.6
C03p03490 Brassica napus HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 67.6
BraA03t09667Z Brassica rapa HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 67.6
Dinv09671 Davidia involucrata HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 73.5
FAN21G3230 Fragaria x ananassa HOM05D002814 ORTHO05D003303 2.2e-06 54.3 34 73.5
Carub.0008s1903 Capsella rubella HOM05D002814 ORTHO05D003303 2.9e-06 53.9 33 66.7
TAR623G0752 Trochodendron aralioides HOM05D002814 ORTHO05D003303 2.9e-06 53.9 34 67.6
Atru.chr3.4117 Acer truncatum HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 70.6
A10p28900 Brassica napus HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 67.6
BraA10t44937Z Brassica rapa HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 67.6
CANSAT54G2694 Cannabis sativa HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 70.6
Migut.N00758 Erythranthe guttata HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 67.6
Thhalv10013051m.g Eutrema salsugineum HOM05D002814 ORTHO05D003303 3.7e-06 53.5 33 69.7
Thhalv10019628m.g Eutrema salsugineum HOM05D002814 ORTHO05D003303 3.7e-06 53.5 33 69.7
THA.LOC104799386 Tarenaya hassleriana HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 70.6
TAR633G1702 Trochodendron aralioides HOM05D002814 ORTHO05D003303 3.7e-06 53.5 34 70.6
ATR0594G055 Amborella trichopoda HOM05D002814 ORTHO05D003303 4.9e-06 53.1 34 67.6
AT5G07120 Arabidopsis thaliana HOM05D002814 ORTHO05D003303 4.9e-06 53.1 34 67.6
Rhsim13G0064000 Rhododendron simsii HOM05D002814 ORTHO05D003303 4.9e-06 53.1 34 67.6
BolC3t12891H Brassica oleracea HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 64.7
COL.COLO4_11155 Corchorus olitorius HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 67.6
Duzib168G0586 Durio zibethinus HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 67.6
Gohir.A03G025400 Gossypium hirsutum HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 67.6
Gohir.D03G143100 Gossypium hirsutum HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 67.6
Gorai.003G150300 Gossypium raimondii HOM05D002814 ORTHO05D003303 6.4e-06 52.8 34 67.6
MD11G1058400 Malus domestica HOM05D002814 ORTHO05D003303 8.3e-06 52.4 34 70.6
PGR102G1098 Punica granatum HOM05D002814 ORTHO05D003303 8.3e-06 52.4 34 70.6


User provided reference genes

Program Settings