Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.1e-153 543.5 268 100.0
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-133 478.8 254 94.9
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-133 478.8 254 94.9
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-133 478.8 254 94.9
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.8e-132 474.2 254 94.1
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 3.6e-125 451.8 254 90.6
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.8e-124 449.5 254 89.8
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 2.3e-124 449.1 254 89.8
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.2e-123 446.8 254 89.8
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.2e-122 442.6 248 91.1
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 3.2e-121 438.7 254 88.2
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 7.3e-118 427.6 254 85.8
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.4e-116 423.3 254 85.8
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 3.1e-116 422.2 247 87.4
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 5.2e-116 421.4 254 85.4
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 4.4e-115 418.3 254 84.6
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-115 417.9 250 86.0
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-115 417.9 250 86.0
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 2.9e-114 415.6 250 85.6
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 3.7e-114 415.2 250 85.6
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 6.0e-112 407.9 241 87.1
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 7.8e-112 407.5 239 86.6
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 1.9e-110 402.9 254 83.9
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 7.3e-110 401.0 241 87.1
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 7.3e-110 401.0 241 87.1
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 9.5e-110 400.6 254 83.5
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.6e-109 399.8 239 85.4
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.8e-109 399.1 257 82.9
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.8e-109 399.1 257 82.9
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 6.2e-109 397.9 244 84.0
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 1.8e-108 396.4 239 85.4
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 1.8e-108 396.4 239 85.4
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 1.8e-108 396.4 239 85.4
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 3.1e-108 395.6 264 80.7
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 3.1e-108 395.6 264 80.7
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 4.0e-108 395.2 254 81.5
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.2e-107 393.7 236 86.4
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 2.0e-107 392.9 257 81.3
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 3.4e-107 392.1 239 83.7
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 2.2e-106 389.4 248 81.9
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.1e-102 377.1 246 78.5
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.1e-102 377.1 236 82.6
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 8.9e-100 367.5 246 76.0
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 4.2e-97 358.6 239 78.7
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.0e-95 354.0 283 70.0
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 1.4e-92 343.6 257 74.7
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 1.4e-92 343.6 268 73.1
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 4.6e-88 328.6 171 95.3
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 8.7e-87 324.3 238 74.8
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 2.1e-85 319.7 255 69.8
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 5.8e-83 311.6 225 74.2
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.2e-82 309.7 206 77.7
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 9.9e-75 284.3 238 67.2
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 1.7e-74 283.5 230 68.3
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-69 266.2 250 60.4
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-69 266.2 250 60.4
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-69 266.2 250 60.4
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-69 266.2 250 60.4
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-69 266.2 250 60.4
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.9e-66 256.1 151 86.8
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 7.9e-64 248.1 250 57.6
Sopen05g027070 Solanum pennellii HOM05D001987 ORTHO05D006514 8.2e-61 238.0 138 87.7
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-58 230.7 146 80.1
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 3.8e-50 202.6 263 49.4
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 3.0e-47 193.0 142 70.4
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 3.9e-47 192.6 129 76.0
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 1.5e-46 190.7 112 84.8
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.7e-46 188.0 106 86.8
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.3e-45 187.6 106 89.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.7e-45 187.2 245 53.9
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 9.1e-44 181.4 106 85.8
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 1.2e-43 181.0 245 53.5
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.3e-42 177.6 106 85.8
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 1.9e-41 173.7 99 86.9
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 5.5e-41 172.2 120 75.0
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 9.4e-41 171.4 114 78.9
CAN.G1202.8 Capsicum annuum HOM05D001987 ORTHO05D006514 6.7e-39 165.2 91 92.3
Nitab4.5_0000309g0220 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.4e-38 162.5 91 86.8
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 2.0e-35 153.7 84 90.5
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 1.8e-31 140.6 89 78.7
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.1e-28 129.8 89 74.2
Nitab4.5_0000334g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.0e-28 128.6 99 67.7
Nitab4.5_0009703g0120 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.1e-28 128.3 104 68.3
Nitab4.5_0011784g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.6e-24 117.5 62 90.3
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 4.7e-24 115.9 81 76.5
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 6.8e-23 112.1 64 89.1
Solyc05g045770.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.7e-19 98.6 64 76.6
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 1.7e-18 97.4 67 76.1
SHI01961 Sapria himalayana HOM05D001987 ORTHO05D006514 1.9e-17 94.0 160 41.9
Solyc12g035815.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.5e-17 91.7 112 50.9
TPR.G21771 Trifolium pratense HOM05D001987 ORTHO05D006514 1.0e-15 88.2 84 58.3
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.5e-14 82.0 54 75.9
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-13 81.3 63 68.3
Solyc05g045822.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.2e-13 80.5 81 53.1
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 9.2e-12 75.1 44 79.5
Lalb_Chr19g0127771 Lupinus albus HOM05D001987 ORTHO05D006514 1.6e-11 74.3 47 78.7
BraSC48t46240Z Brassica rapa HOM05D001987 ORTHO05D006514 1.3e-10 71.2 52 73.1
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 2.5e-09 67.0 32 96.9
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 2.0e-06 57.4 181 32.0
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.0e-06 57.4 29 82.8
EL10Ac5g12759 Beta vulgaris HOM05D001987 ORTHO05D006514 4.4e-06 56.2 74 43.2


User provided reference genes

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