Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g045870.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.7e-35 151.0 76 100.0
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-29 132.1 68 97.1
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-29 132.1 68 97.1
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-29 132.1 68 97.1
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-29 132.1 68 97.1
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-29 132.1 68 97.1
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 4.0e-29 131.0 71 93.0
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 5.2e-29 130.6 68 95.6
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 5.2e-29 130.6 68 95.6
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.5e-28 126.7 68 92.6
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 9.8e-28 126.3 71 90.1
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.3e-27 125.9 71 88.7
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.7e-27 125.6 71 90.1
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 1.7e-27 125.6 71 88.7
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 1.7e-27 125.6 71 88.7
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.7e-27 125.6 71 90.1
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.2e-27 125.2 71 90.1
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.2e-27 125.2 71 90.1
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 2.2e-27 125.2 71 90.1
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 2.2e-27 125.2 71 90.1
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 8.3e-27 123.2 71 88.7
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 8.3e-27 123.2 71 88.7
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 8.3e-27 123.2 71 88.7
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-26 122.9 71 88.7
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.9e-26 122.1 71 87.3
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 1.2e-25 119.4 71 87.3
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 1.2e-25 119.4 71 87.3
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.2e-25 119.4 71 87.3
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 1.2e-25 119.4 71 87.3
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.0e-25 118.6 71 85.9
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 2.0e-25 118.6 71 85.9
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 2.0e-25 118.6 71 85.9
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 1.0e-24 116.3 71 84.5
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 1.7e-24 115.5 72 87.5
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 3.0e-24 114.8 67 86.6
Gohir.A13G113500 Gossypium hirsutum HOM05D001987 ORTHO05D006514 3.0e-24 114.8 67 86.6
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 3.0e-24 114.8 67 86.6
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 6.6e-24 113.6 71 83.1
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 67 83.6
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 5.6e-23 110.5 72 81.9
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 68 82.4
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 68 82.4
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 68 82.4
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 68 82.4
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.6e-23 110.5 68 82.4
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 2.1e-22 108.6 72 80.6
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.2e-22 107.1 67 82.1
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 1.1e-21 106.3 65 80.0
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 3.1e-21 104.8 74 78.4
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 4.0e-21 104.4 71 76.1
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.0e-20 102.1 68 76.5
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.0e-20 102.1 68 76.5
Dinv35896 Davidia involucrata HOM05D001987 ORTHO05D006514 3.4e-20 101.3 56 89.3
Nitab4.5_0007962g0010 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.9e-20 99.8 58 87.9
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 9.9e-20 99.8 68 73.5
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 9.9e-20 99.8 68 73.5
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 1.3e-19 99.4 68 77.9
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.1e-18 96.3 68 76.5
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.1e-18 96.3 68 76.5
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.1e-18 96.3 67 74.6
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 9.2e-18 93.2 70 74.3
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.2e-18 93.2 60 80.0
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 1.2e-17 92.8 70 72.9
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 1.6e-17 92.4 68 75.0
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 7.3e-15 83.6 73 61.6
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 1.8e-13 79.0 68 66.2
Solyc05g045828.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.8e-13 79.0 43 95.3
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.4e-12 74.7 66 62.1
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 1.2e-06 56.2 36 83.3


User provided reference genes

Program Settings