Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028880.3 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.2e-24 114.8 56 100.0
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-21 105.1 55 92.7
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-21 105.1 55 92.7
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-21 105.1 55 92.7
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-21 105.1 55 92.7
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-21 105.1 55 92.7
CAN.G612.2 Capsicum annuum HOM05D000216 ORTHO05D003518 5.0e-21 103.6 55 90.9
unitig_91.g26495 Utricularia gibba HOM05D000216 ORTHO05D003518 8.6e-21 102.8 55 89.1
Oeu064454.1 Olea europaea HOM05D000216 ORTHO05D003518 1.9e-20 101.7 55 89.1
MSTRG.22048 Avicennia marina HOM05D000216 ORTHO05D003518 2.5e-20 101.3 55 87.3
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 2.5e-20 101.3 55 89.1
LjContig00489g0007578 Lotus japonicus HOM05D000216 ORTHO05D003518 2.5e-20 101.3 55 87.3
CSS0038652 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003518 7.3e-20 99.8 55 87.3
Migut.D01338 Erythranthe guttata HOM05D000216 ORTHO05D003518 7.3e-20 99.8 55 85.5
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 1.2e-19 99.0 55 83.6
HanXRQChr14g0428001 Helianthus annuus HOM05D000216 ORTHO05D003518 2.1e-19 98.2 54 85.2
HanXRQChr00c0313g0573451 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
HanXRQChr00c0601g0576521 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
HanXRQChr08g0210191 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
HanXRQChr11g0326621 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
HanXRQChr13g0415481 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
HanXRQCPg0579811 Helianthus annuus HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
Lsat_1_v5_gn_0_46600 Lactuca sativa HOM05D000216 ORTHO05D003518 2.8e-19 97.8 54 87.0
Lj2P1239T112 Lonicera japonica HOM05D000216 ORTHO05D003518 4.7e-19 97.1 54 83.3
COL.COLO4_02626 Corchorus olitorius HOM05D000216 ORTHO05D003518 6.1e-19 96.7 54 87.0
DCAR_032473 Daucus carota HOM05D000216 ORTHO05D003518 1.0e-18 95.9 54 83.3
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.4e-18 95.5 54 85.2
Gohir.A05G086033 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.4e-18 95.5 54 87.0
PGR111G0003 Punica granatum HOM05D000216 ORTHO05D003518 2.3e-18 94.7 54 85.2
Ah.05g176560 Amaranthus hybridus HOM05D000216 ORTHO05D003518 3.1e-18 94.4 55 83.6
Ah.10g027610 Amaranthus hybridus HOM05D000216 ORTHO05D003518 3.1e-18 94.4 55 83.6
Ah.10g027790 Amaranthus hybridus HOM05D000216 ORTHO05D003518 3.1e-18 94.4 55 83.6
Psat0s2961g0040 Pisum sativum HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 83.3
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 83.3
Psat2g079840 Pisum sativum HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 83.3
Psat6g219440 Pisum sativum HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 83.3
Sed0001459 Sechium edule HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 85.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.1e-18 94.4 54 85.2
Sed0025851 Sechium edule HOM05D000216 ORTHO05D003518 3.1e-18 94.4 54 85.2
MELO3C000623.2 Cucumis melo HOM05D000216 ORTHO05D003518 4.0e-18 94.0 54 83.3
MELO3C001352.2 Cucumis melo HOM05D000216 ORTHO05D003518 4.0e-18 94.0 54 83.3
Nitab4.5_0001140g0210 Nicotiana tabacum HOM05D000216 ORTHO05D003518 5.2e-18 93.6 55 81.8
RcHm_v2.0_CPg0502421 Rosa chinensis HOM05D000216 ORTHO05D003518 6.8e-18 93.2 54 83.3
CsaV3_UNG207820 Cucumis sativus L. HOM05D000216 ORTHO05D003518 8.9e-18 92.8 54 83.3
Nn020s41500 Nelumbo nucifera HOM05D000216 ORTHO05D003518 8.9e-18 92.8 54 83.3
Sed0001731 Sechium edule HOM05D000216 ORTHO05D003518 8.9e-18 92.8 54 83.3
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 8.9e-18 92.8 54 83.3
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 1.2e-17 92.4 55 81.8
PSO548G0007 Papaver somniferum HOM05D000216 ORTHO05D003518 1.2e-17 92.4 54 83.3
Ah.10g028510 Amaranthus hybridus HOM05D000216 ORTHO05D003518 1.5e-17 92.0 55 81.8
QL93p1261_0001 Quercus lobata HOM05D000216 ORTHO05D003518 1.5e-17 92.0 54 83.3
Solyc01g017530.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.5e-17 92.0 55 81.8
COL.COLO4_03033 Corchorus olitorius HOM05D000216 ORTHO05D003518 2.0e-17 91.7 50 88.0
Psat6g018440 Pisum sativum HOM05D000216 ORTHO05D003518 2.0e-17 91.7 55 78.2
LjContig00318g0019073 Lotus japonicus HOM05D000216 ORTHO05D003518 2.6e-17 91.3 54 81.5
BcaC05g28802 Brassica carinata HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BNapus_Darmor_BZH_scaffold_253p00050 Brassica napus HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BolSC29t60572H Brassica oleracea HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BolSC37t60769H Brassica oleracea HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BolSC45t60936H Brassica oleracea HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BolSC46t60986H Brassica oleracea HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BolSC49t61199H Brassica oleracea HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BraSC143t45680Z Brassica rapa HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BraSC58t46404Z Brassica rapa HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
BraSC59t46514Z Brassica rapa HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
CARHR281910 Cardamine hirsuta HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 3.4e-17 90.9 55 76.4
Gohir.A05G307932 Gossypium hirsutum HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 81.5
Medtr4g051110 Medicago truncatula HOM05D000216 ORTHO05D003518 3.4e-17 90.9 54 79.6
Lalb_Chr01g0008431 Lupinus albus HOM05D000216 ORTHO05D003518 4.4e-17 90.5 54 81.5
Lalb_Chr09g0335351 Lupinus albus HOM05D000216 ORTHO05D003518 4.4e-17 90.5 54 81.5
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 4.4e-17 90.5 54 79.6
ATCG00160 Arabidopsis thaliana HOM05D000216 ORTHO05D003518 5.8e-17 90.1 54 79.6
Aa31csc39G170 Aethionema arabicum HOM05D000216 ORTHO05D003518 1.3e-16 89.0 54 77.8
AUR62030169 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.3e-16 89.0 55 76.4
AUR62030121 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.7e-16 88.6 55 76.4
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 2.2e-16 88.2 54 75.9
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.2e-16 88.2 54 75.9
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 2.2e-16 88.2 54 75.9
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 2.2e-16 88.2 54 79.6
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.2e-16 88.2 55 78.2
Solyc07g021280.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.2e-16 88.2 55 76.4
arahy.Tifrunner.gnm1.ann1.RU7F0N Arachis hypogaea HOM05D000216 ORTHO05D003518 2.9e-16 87.8 54 75.9
AUR62041876 Chenopodium quinoa HOM05D000216 ORTHO05D003518 2.9e-16 87.8 55 76.4
Thhalv10023738m.g Eutrema salsugineum HOM05D000216 ORTHO05D003518 2.9e-16 87.8 54 77.8
CiPaw.12G030900 Carya illinoinensis HOM05D000216 ORTHO05D003518 3.7e-16 87.4 54 79.6
Hund15941 Selenicereus undatus HOM05D000216 ORTHO05D003518 3.7e-16 87.4 56 76.8
AUR62021207 Chenopodium quinoa HOM05D000216 ORTHO05D003518 4.9e-16 87.0 55 76.4
Medtr7g116690 Medicago truncatula HOM05D000216 ORTHO05D003518 8.3e-16 86.3 54 77.8
Potri.013G139670 Populus trichocarpa HOM05D000216 ORTHO05D003518 8.3e-16 86.3 55 76.4
Potri.019G028700 Populus trichocarpa HOM05D000216 ORTHO05D003518 8.3e-16 86.3 55 76.4
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 1.1e-15 85.9 54 74.1
AL2G20950 Arabidopsis lyrata HOM05D000216 ORTHO05D003518 1.4e-15 85.5 48 81.2
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund29986 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.4e-15 85.5 55 74.5
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund30661 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.4e-15 85.5 55 74.5
Hund30710 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.4e-15 85.5 55 74.5
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.4e-15 85.5 55 74.5
Atru.chr13.1804 Acer truncatum HOM05D000216 ORTHO05D003518 2.4e-15 84.7 55 72.7
Atru.chr13.1817 Acer truncatum HOM05D000216 ORTHO05D003518 2.4e-15 84.7 55 72.7
CARHR217780 Cardamine hirsuta HOM05D000216 ORTHO05D003518 2.4e-15 84.7 54 75.9
Lsat_1_v5_gn_1_56581 Lactuca sativa HOM05D000216 ORTHO05D003518 2.4e-15 84.7 54 77.8
Lsat_1_v5_gn_7_100680 Lactuca sativa HOM05D000216 ORTHO05D003518 3.2e-15 84.3 50 82.0
Psat2g044400 Pisum sativum HOM05D000216 ORTHO05D003518 4.1e-15 84.0 50 80.0
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 5.4e-15 83.6 54 70.4
Gorai.002G152000 Gossypium raimondii HOM05D000216 ORTHO05D003518 7.0e-15 83.2 55 76.4
Gohir.D01G121320 Gossypium hirsutum HOM05D000216 ORTHO05D003518 9.2e-15 82.8 52 78.8
HanXRQChr05g0134331 Helianthus annuus HOM05D000216 ORTHO05D003518 2.0e-14 81.6 54 75.9
HPP92_007916 Vanilla planifolia HOM05D000216 ORTHO05D003638 4.6e-14 80.5 50 74.0
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 6.0e-14 80.1 54 74.1
HPP92_007915 Vanilla planifolia HOM05D000216 ORTHO05D004083 6.0e-14 80.1 50 74.0
Nitab4.5_0001761g0250 Nicotiana tabacum HOM05D000216 ORTHO05D003518 1.0e-13 79.3 45 86.7
Gohir.A01G134033 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.7e-13 78.6 55 74.5
arahy.Tifrunner.gnm1.ann1.D2ZWCD Arachis hypogaea HOM05D000216 ORTHO05D003518 2.3e-13 78.2 53 67.9
EL10Ac2g02604 Beta vulgaris HOM05D000216 ORTHO05D003518 3.9e-13 77.4 47 76.6
Gohir.D05G308250 Gossypium hirsutum HOM05D000216 ORTHO05D003518 3.9e-13 77.4 54 72.2
Phvul.003G256732 Phaseolus vulgaris HOM05D000216 ORTHO05D003518 5.0e-13 77.0 55 61.8
Pp3c7_4970 Physcomitrium patens HOM05D000216 ORTHO05D003518 8.6e-13 76.3 54 61.1
arahy.Tifrunner.gnm1.ann1.S81HDC Arachis hypogaea HOM05D000216 ORTHO05D003518 1.1e-12 75.9 53 66.0
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 1.5e-12 75.5 54 63.0
HanXRQChr14g0428021 Helianthus annuus HOM05D000216 ORTHO05D003518 3.3e-12 74.3 38 86.8
HanXRQChr00c0300g0573201 Helianthus annuus HOM05D000216 ORTHO05D003518 4.3e-12 73.9 38 89.5
HanXRQChr13g0414271 Helianthus annuus HOM05D000216 ORTHO05D003518 4.3e-12 73.9 38 89.5
Zm00001eb226420 Zea mays HOM05D000216 ORTHO05D003518 4.3e-12 73.9 54 63.0
CAN.G184.72 Capsicum annuum HOM05D000216 ORTHO05D003518 9.5e-12 72.8 44 79.5
Lsat_1_v5_gn_0_22681 Lactuca sativa HOM05D000216 ORTHO05D003518 1.2e-11 72.4 38 86.8
Mapoly0121s0021 Marchantia polymorpha HOM05D000216 ORTHO05D003518 2.1e-11 71.6 48 64.6
Hund01857 Selenicereus undatus HOM05D000216 ORTHO05D003518 2.8e-11 71.2 55 65.5
Zm00001eb441580 Zea mays HOM05D000216 ORTHO05D003518 3.6e-11 70.9 51 62.7
Gorai.005G227600 Gossypium raimondii HOM05D000216 ORTHO05D003518 1.1e-10 69.3 38 84.2
Gorai.009G328500 Gossypium raimondii HOM05D000216 ORTHO05D003518 1.1e-10 69.3 52 67.3
Eucgr.K02524 Eucalyptus grandis HOM05D000216 ORTHO05D003518 1.8e-10 68.6 54 66.7
Gorai.007G076100 Gossypium raimondii HOM05D000216 ORTHO05D003518 2.3e-10 68.2 43 76.7
Hund29488 Selenicereus undatus HOM05D000216 ORTHO05D003518 4.0e-10 67.4 44 72.7
Lalb_Chr23g0274551 Lupinus albus HOM05D000216 ORTHO05D003518 8.9e-10 66.2 47 66.0
Solyc12g062630.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 5.8e-09 63.5 38 76.3
Zm00001eb437140 Zea mays HOM05D000216 ORTHO05D003518 7.5e-09 63.2 46 63.0
HanXRQChr14g0447531 Helianthus annuus HOM05D000216 ORTHO05D003518 9.8e-09 62.8 41 70.7
SEGI_00070 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.3e-08 62.4 54 51.9
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-08 62.4 54 51.9
SEGI_07796 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.3e-08 62.4 54 51.9
SEGI_22490 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.3e-08 62.4 54 51.9
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-08 62.4 54 51.9
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-08 62.4 54 51.9
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-08 62.4 54 51.9
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.3e-08 62.4 54 51.9
SEGI_38828 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 1.3e-08 62.4 54 51.9
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 4.9e-08 60.5 36 77.8
Eucgr.E00946 Eucalyptus grandis HOM05D000216 ORTHO05D003518 1.1e-07 59.3 38 68.4
MD10G1089500 Malus domestica HOM05D000216 ORTHO05D003518 1.1e-07 59.3 44 70.5


User provided reference genes

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