Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g041740.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 7.6e-49 196.8 98 100.0
PGSC0003DMG400013767 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.5e-15 85.5 92 42.4
Peaxi162Scf00079g00195 Petunia axillaris HOM05D000155 ORTHO05D000022 8.0e-14 80.5 81 43.2
PGSC0003DMG400014751 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.8e-13 79.3 91 42.9
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.8e-13 77.0 90 37.8
Nitab4.5_0003335g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.4e-12 74.7 82 42.7
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-12 73.9 80 48.8
Nitab4.5_0000108g0070 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.3e-11 73.2 74 48.6
Nitab4.5_0000206g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-11 72.4 76 47.4
PGSC0003DMG400021800 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.7e-11 71.6 75 44.0
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-10 70.1 76 44.7
Nitab4.5_0002956g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-10 68.9 92 34.8
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-10 68.6 80 40.0
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-10 68.2 87 39.1
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-10 68.2 87 39.1
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 4.1e-10 68.2 81 40.7
Nitab4.5_0002045g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.1e-10 67.0 76 39.5
CAN.G108.25 Capsicum annuum HOM05D000155 ORTHO05D000022 1.2e-09 66.6 87 36.8
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 1.2e-09 66.6 83 39.8
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 1.2e-09 66.6 78 41.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.6e-09 66.2 81 39.5
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 1.6e-09 66.2 81 39.5
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 2.0e-09 65.9 87 40.2
Nitab4.5_0003072g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-09 65.5 74 45.9
Nitab4.5_0009185g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-09 65.5 76 36.8
PGSC0003DMG400037358 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.7e-09 65.5 79 36.7
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 7.7e-09 63.9 90 36.7
PGSC0003DMG400041121 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.7e-09 63.9 81 40.7
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-08 63.5 75 40.0
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-08 63.5 81 37.0
Sopen05g017850 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-08 63.5 81 37.0
Sopen03g011810 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-08 63.2 83 37.3
Nitab4.5_0000563g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 78 35.9
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 80 37.5
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-08 62.8 82 36.6
Nitab4.5_0005413g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-08 62.4 69 42.0
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 2.2e-08 62.4 83 39.8
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.2e-08 62.4 81 34.6
PGSC0003DMG400041332 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.2e-08 62.4 90 36.7
Nitab4.5_0000256g0270 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-08 62.0 87 36.8
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 2.9e-08 62.0 80 43.8
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 2.9e-08 62.0 81 39.5
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 62.0 81 38.3
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-08 62.0 80 38.8
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 5.0e-08 61.2 73 42.5
CiPaw.04G193300 Carya illinoinensis HOM05D000053 ORTHO05D000035 6.5e-08 60.8 94 36.2
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 8.5e-08 60.5 83 37.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.5e-08 60.5 81 38.3
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.5e-08 60.5 87 36.8
Peaxi162Scf00251g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-07 60.1 90 34.4
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-07 60.1 81 39.5
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-07 59.7 93 34.4
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.5e-07 59.7 74 39.2
CAN.G1598.9 Capsicum annuum HOM05D000155 ORTHO05D000022 1.9e-07 59.3 59 39.0
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 59.3 81 37.0
Sopen05g018930 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-07 59.3 81 33.3
Sopen08g015460 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-07 59.3 81 37.0
Nitab4.5_0000365g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-07 58.2 75 33.3
Nitab4.5_0000639g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-07 58.2 64 39.1
Nitab4.5_0003487g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000022 4.2e-07 58.2 75 37.3
PGSC0003DMG400012094 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.2e-07 58.2 74 37.8
CAN.G1086.3 Capsicum annuum HOM05D024491 ORTHO05D000022 5.5e-07 57.8 82 39.0
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 7.2e-07 57.4 81 35.8
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 9.4e-07 57.0 81 34.6
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-06 56.6 74 39.2
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-06 56.2 78 39.7
Nitab4.5_0004294g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-06 56.2 63 41.3
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-06 56.2 78 34.6
Nitab4.5_0001141g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-06 55.8 86 36.0
Nitab4.5_0001704g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-06 55.8 78 34.6
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-06 55.8 79 35.4
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-06 55.5 81 37.0
Nitab4.5_0000358g0080 Nicotiana tabacum HOM05D004990 ORTHO05D000022 2.7e-06 55.5 58 41.4
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 2.7e-06 55.5 84 33.3
Nitab4.5_0007332g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.6e-06 55.1 70 35.7
SHI19424 Sapria himalayana HOM05D004990 ORTHO05D000022 3.6e-06 55.1 91 35.2
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 3.6e-06 55.1 81 34.6
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-06 55.1 81 34.6
CAN.G2020.2 Capsicum annuum HOM05D024491 ORTHO05D000022 4.7e-06 54.7 57 38.6
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-06 54.7 82 37.8
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.1e-06 54.3 80 35.0
Peaxi162Scf00177g01234 Petunia axillaris HOM05D000155 ORTHO05D000022 6.1e-06 54.3 81 32.1
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 6.1e-06 54.3 85 35.3
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 6.1e-06 54.3 85 35.3
PGSC0003DMG400015929 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.1e-06 54.3 61 42.6
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-06 53.9 81 30.9


User provided reference genes

Program Settings