Gene: CiPaw.04G193300
General Information
Structural Information
- Species Carya illinoinensis
- Gene Identifier CiPaw.04G193300
- Transcript Identifier CiPaw.04G193300.1
- Gene Type Coding gene
- Location Chr04 : 43977111-43985325 : negative
Gene Family Information
- ID HOM05D000053
- #Genes/#Species 4369/94
- Phylogenetic origin
- ID ORTHO05D000035
- #Genes/#Species 3283/88
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id CiPaw.04G193300.v1.1
- pacid 45827905
- locus Caril.04G192000
Descriptions
- Description PF08263//PF13456//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Reverse transcriptase-like (RVT_3) // Leucine rich repeat (LRR_8)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002240 | ISO | PLAZA Integrative Orthology | response to molecule of oomycetes origin | AT2G32680 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G25910 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | Solyc01g006550.3 |
| GO:0010555 | ISO | PLAZA Integrative Orthology | response to mannitol | AT2G32680 |
| GO:0002758 | ISO | PLAZA Integrative Orthology | innate immune response-activating signal transduction | AT2G32680 |
| GO:0140426 | ISO | PLAZA Integrative Orthology | PAMP-triggered immunity signalling pathway | AT2G32680 |
| GO:0002229 | ISO | PLAZA Integrative Orthology | defense response to oomycetes | AT2G32680 |
| GO:0002238 | ISO | PLAZA Integrative Orthology | response to molecule of fungal origin | AT2G32680 |
| GO:0002237 | ISO | PLAZA Integrative Orthology | response to molecule of bacterial origin | AT2G32680 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT2G32680 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT4G13880 |
| GO:0010073 | ISO | PLAZA Integrative Orthology | meristem maintenance | AT1G71400 |
| GO:0007165 | ISO | PLAZA Integrative Orthology | signal transduction | AT1G71400 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT2G33080 |
| GO:0032491 | ISO | PLAZA Integrative Orthology | detection of molecule of fungal origin | AT2G32680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0019901 | ISO | PLAZA Integrative Orthology | protein kinase binding | AT2G32680 |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR003591 | Leucine-rich repeat, typical subtype |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR001611 | Leucine-rich repeat |
| IPR036397 | Ribonuclease H superfamily |
| IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
| IPR002156 | Ribonuclease H domain |
| IPR044730 | Ribonuclease H-like domain, plant type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |