Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g032450.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 8.5e-34 146.4 70 100.0
DCAR_032515 Daucus carota HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQChr01g0020261 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQChr02g0052541 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQChr10g0299321 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQChr11g0326921 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
HanXRQCPg0580141 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lsat_1_v5_gn_3_85721 Lactuca sativa HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lsat_1_v5_gn_5_170261 Lactuca sativa HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lsat_1_v5_gn_5_50360 Lactuca sativa HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lsat_1_v5_gn_9_51020 Lactuca sativa HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lj2A1237G133 Lonicera japonica HOM05D000580 ORTHO05D001362 3.4e-19 97.8 62 74.2
Lj2P1239T125 Lonicera japonica HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Lju5009A0G59 Lonicera japonica HOM05D000580 ORTHO05D001785 3.4e-19 97.8 62 74.2
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.9e-19 97.1 62 72.6
AL2G20600 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
AL2G21670 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
ATCG00720 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
A08p09850 Brassica napus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BolSC29t60605H Brassica oleracea HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BolSC35t60665H Brassica oleracea HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BolSC47t61079H Brassica oleracea HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BraA08t32979Z Brassica rapa HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BraSC58t46437Z Brassica rapa HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BraSC59t46575Z Brassica rapa HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Carub.0006s2562 Capsella rubella HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
MELO3C000277.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Gohir.1Z078501 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Gohir.A01G104300 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hma1.2p1_2223F.1_g317409 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
MBI16_g45336_MAGBIO Magnolia biondii HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
PSO548G0043 Papaver somniferum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Psat0s7142g0160 Pisum sativum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Psat6g181600 Pisum sativum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Potri.011G074700 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
PGR111G0129 Punica granatum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
QL93p1043_0018 Quercus lobata HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
SabraPtG0004100 Salix brachista HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Sed0006310 Sechium edule HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Sed0021642 Sechium edule HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Sed0028104 Sechium edule HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
Solyc00g500027.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.0e-18 96.3 62 72.6
BraA06t25381Z Brassica rapa HOM05D000580 ORTHO05D001785 1.3e-18 95.9 62 71.0
EL10Ac9g22458 Beta vulgaris HOM05D000580 ORTHO05D001785 2.2e-18 95.1 62 72.6
EL10As12g24032 Beta vulgaris HOM05D000580 ORTHO05D001785 2.2e-18 95.1 62 72.6
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 2.9e-18 94.7 62 71.0
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 2.9e-18 94.7 62 71.0
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 2.9e-18 94.7 62 71.0
Duzib252G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 2.9e-18 94.7 62 71.0
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 2.9e-18 94.7 62 71.0
Psat6g181560 Pisum sativum HOM05D000580 ORTHO05D001785 3.8e-18 94.4 62 71.0
Lj2P1234T99 Lonicera japonica HOM05D000580 ORTHO05D001785 5.0e-18 94.0 62 72.6
Gohir.D01G102073 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.5e-18 93.6 62 71.0
Potri.011G113784 Populus trichocarpa HOM05D000580 ORTHO05D001785 6.5e-18 93.6 62 71.0
Gohir.A12G178635 Gossypium hirsutum HOM05D000580 ORTHO05D001785 8.5e-18 93.2 62 69.4
C02p28670 Brassica napus HOM05D000580 ORTHO05D001785 1.4e-17 92.4 62 71.0
Hund08569 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.4e-17 92.4 62 71.0
HanXRQChr11g0345241 Helianthus annuus HOM05D000580 ORTHO05D001785 2.5e-17 91.7 62 71.0
CsaV3_4G007360 Cucumis sativus L. HOM05D000580 ORTHO05D001785 9.4e-17 89.7 59 71.2
COL.COLO4_00602 Corchorus olitorius HOM05D000580 ORTHO05D001785 1.2e-16 89.4 59 71.2
SEGI_11526 Sequoiadendron giganteum HOM05D000580 ORTHO05D001785 2.1e-16 88.6 62 67.7
SEGI_20476 Sequoiadendron giganteum HOM05D000580 ORTHO05D001785 2.1e-16 88.6 62 67.7
Prupe.1G203800 Prunus persica HOM05D000580 ORTHO05D001785 3.6e-16 87.8 62 64.5
Nitab4.5_0003957g0010 Nicotiana tabacum HOM05D000580 ORTHO05D001785 1.4e-15 85.9 62 66.1
SEGI_07086 Sequoiadendron giganteum HOM05D000580 ORTHO05D001785 2.3e-15 85.1 61 65.6
Peaxi162Scf00527g00321 Petunia axillaris HOM05D000580 ORTHO05D001785 3.0e-15 84.7 84 53.6
Psat0s1446g0280 Pisum sativum HOM05D000580 ORTHO05D001785 3.3e-14 81.3 56 69.6
Gohir.D11G238251 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.2e-11 72.8 62 59.7
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 4.5e-11 70.9 45 71.1
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 4.5e-11 70.9 45 71.1
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 7.7e-11 70.1 45 68.9
HanXRQChr16g0529041 Helianthus annuus HOM05D000580 ORTHO05D001785 7.7e-11 70.1 53 64.2
LjContig00319g0027618 Lotus japonicus HOM05D000580 ORTHO05D001785 7.7e-11 70.1 62 58.1
Lalb_Chr18g0049351 Lupinus albus HOM05D000580 ORTHO05D001785 1.0e-10 69.7 60 55.0
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 1.3e-10 69.3 43 72.1
Hund29508 Selenicereus undatus HOM05D000580 ORTHO05D001785 3.8e-10 67.8 42 73.8
CAN.G150.10 Capsicum annuum HOM05D000580 ORTHO05D001785 8.5e-10 66.6 51 58.8
Ah.10g027360 Amaranthus hybridus HOM05D000580 ORTHO05D006815 1.5e-09 65.9 41 73.2
ECA238G4742 Erigeron canadensis HOM05D000012 ORTHO05D006210 2.0e-06 55.5 41 58.5
BraSC138t45557Z Brassica rapa HOM05D000580 ORTHO05D001785 7.5e-06 53.5 33 72.7
Nitab4.5_0000033g0060 Nicotiana tabacum HOM05D000580 ORTHO05D001785 9.7e-06 53.1 34 58.8
Oeu058363.1 Olea europaea HOM05D000580 ORTHO05D001785 9.7e-06 53.1 39 66.7


User provided reference genes

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