Gene: Ah.10g027480
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.10g027480
- Transcript Identifier Ah.10g027480-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_10 : 6149073-6152345 : negative
Gene Family Information
- ID HOM05D000580
- #Genes/#Species 959/83
- Phylogenetic origin
- ID ORTHO05D001785
- #Genes/#Species 356/60
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Ah.10g027480-v1.1.a1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019684 | ISO | PLAZA Integrative Orthology | photosynthesis, light reaction | ATCG00730 |
| GO:0022904 | IEA | InterPro | respiratory electron transport chain | |
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain | |
| GO:0050821 | IEA | InterPro | protein stabilization | |
| GO:0015979 | IEA | InterPro | photosynthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | |
| GO:0020037 | ISO | PLAZA Integrative Orthology | heme binding | ATCG00720 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00720 |
| GO:0009055 | IEA | InterPro | electron transfer activity | |
| GO:0042301 | IEA | InterPro | phosphate ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00730 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00730 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00730 |
| GO:0009512 | ISO | PLAZA Integrative Orthology | cytochrome b6f complex | ATCG00730 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00730 |
| GO:0042651 | IEA | InterPro | thylakoid membrane | |
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005797 | Cytochrome b/b6, N-terminal |
| IPR036863 | Photosystem II reaction centre protein H superfamily |
| IPR036150 | Cytochrome b/b6, C-terminal domain superfamily |
| IPR001056 | Photosystem II reaction centre protein H |
| IPR027387 | Cytochrome b/b6-like domain superfamily |
| IPR005798 | Cytochrome b/b6, C-terminal |
| IPR005870 | Cytochrome b6/f complex, subunit IV |
| IPR016174 | Di-haem cytochrome, transmembrane |
| Mapman id | Description |
|---|---|
| 1.1.1.2.3 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbH |