Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g021640.2 Solanum lycopersicum HOM05D001829 ORTHO05D007093 4.0e-78 294.7 146 100.0
Solyc05g010180.4 Solanum lycopersicum HOM05D001829 ORTHO05D007093 1.4e-33 146.7 75 94.7
Sopen05g005960 Solanum pennellii HOM05D001829 ORTHO05D007093 1.4e-33 146.7 75 94.7
CAN.G184.51 Capsicum annuum HOM05D001829 ORTHO05D007093 2.3e-33 146.0 75 92.0
Nitab4.5_0000121g0180 Nicotiana tabacum HOM05D001829 ORTHO05D007093 5.1e-33 144.8 75 92.0
Nitab4.5_0008269g0010 Nicotiana tabacum HOM05D001829 ORTHO05D007093 5.1e-33 144.8 75 92.0
Peaxi162Scf00152g01537 Petunia axillaris HOM05D001829 ORTHO05D007093 8.8e-33 144.1 75 90.7
PGSC0003DMG400025098 Solanum tuberosum HOM05D001829 ORTHO05D007093 1.1e-32 143.7 75 92.0
Haze_10034 Corylus avellana HOM05D001829 ORTHO05D007093 1.7e-31 139.8 75 86.7
Sabra03G0002900 Salix brachista HOM05D001829 ORTHO05D007093 2.2e-31 139.4 75 88.0
ClCG10G007140 Citrullus lanatus HOM05D001829 ORTHO05D007093 2.8e-31 139.0 75 85.3
Cc02_g23310 Coffea canephora HOM05D001829 ORTHO05D007093 2.8e-31 139.0 91 75.8
MELO3C016495.2 Cucumis melo HOM05D001829 ORTHO05D007093 2.8e-31 139.0 75 85.3
CsaV3_3G006460 Cucumis sativus L. HOM05D001829 ORTHO05D007093 2.8e-31 139.0 75 85.3
Lj5C267G12 Lonicera japonica HOM05D001829 ORTHO05D007093 6.3e-31 137.9 75 86.7
Manes.07G025600 Manihot esculenta HOM05D001829 ORTHO05D007093 8.2e-31 137.5 75 88.0
Potri.003G005800 Populus trichocarpa HOM05D001829 ORTHO05D007093 1.1e-30 137.1 75 88.0
Eucgr.G00236 Eucalyptus grandis HOM05D001829 ORTHO05D007093 1.8e-30 136.3 75 84.0
PSO170G4495 Papaver somniferum HOM05D001829 ORTHO05D007093 1.8e-30 136.3 95 71.6
PSO782G2303 Papaver somniferum HOM05D001829 ORTHO05D007093 1.8e-30 136.3 95 71.6
Actinidia00173 Actinidia chinensis HOM05D001829 ORTHO05D007093 3.1e-30 135.6 75 85.3
QL02p100897 Quercus lobata HOM05D001829 ORTHO05D007093 3.1e-30 135.6 75 84.0
Atru.chr6.542 Acer truncatum HOM05D001829 ORTHO05D007093 5.3e-30 134.8 75 82.7
Sed0012355 Sechium edule HOM05D001829 ORTHO05D007093 5.3e-30 134.8 75 82.7
TAR376G1141 Trochodendron aralioides HOM05D001829 ORTHO05D007093 6.9e-30 134.4 75 84.0
Zm00001eb210950 Zea mays HOM05D001829 ORTHO05D007093 6.9e-30 134.4 75 84.0
Thecc.02G017000 Theobroma cacao HOM05D001829 ORTHO05D007093 1.2e-29 133.7 75 82.7
Prupe.1G581000 Prunus persica HOM05D001829 ORTHO05D007093 1.5e-29 133.3 75 82.7
Aa31LG2G11200 Aethionema arabicum HOM05D001829 ORTHO05D007093 2.0e-29 132.9 75 82.7
Migut.B00679 Erythranthe guttata HOM05D001829 ORTHO05D007093 2.0e-29 132.9 75 84.0
Migut.B00762 Erythranthe guttata HOM05D001829 ORTHO05D007093 2.0e-29 132.9 75 84.0
Gohir.A01G184800 Gossypium hirsutum HOM05D001829 ORTHO05D007093 2.6e-29 132.5 74 83.8
Gohir.D01G175700 Gossypium hirsutum HOM05D001829 ORTHO05D007093 2.6e-29 132.5 74 83.8
Gorai.002G218000 Gossypium raimondii HOM05D001829 ORTHO05D007093 2.6e-29 132.5 74 83.8
CANSAT35G1138 Cannabis sativa HOM05D001829 ORTHO05D007093 3.4e-29 132.1 75 82.7
Os03g0841900 Oryza sativa ssp. japonica HOM05D001829 ORTHO05D007093 3.4e-29 132.1 75 82.7
TPR.G5984 Trifolium pratense HOM05D001829 ORTHO05D007093 3.4e-29 132.1 74 85.1
HPP92_012700 Vanilla planifolia HOM05D001829 ORTHO05D007093 3.4e-29 132.1 75 81.3
CDE07G1970 Ceratophyllum demersum HOM05D001829 ORTHO05D007093 4.5e-29 131.7 75 81.3
SEGI_02389 Sequoiadendron giganteum HOM05D001829 ORTHO05D007093 4.5e-29 131.7 75 84.0
BcaB07g31149 Brassica carinata HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
BcaC04g22089 Brassica carinata HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
A09p18800 Brassica napus HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
BolC9t55280H Brassica oleracea HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
BraA09t37502Z Brassica rapa HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
CSS0001427 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 82.7
Thhalv10023380m.g Eutrema salsugineum HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
FvH4_5g28280 Fragaria vesca HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
FAN18G1334 Fragaria x ananassa HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 81.3
RcHm_v2.0_Chr7g0220531 Rosa chinensis HOM05D001829 ORTHO05D007093 5.9e-29 131.3 75 80.0
Hma1.2p1_0884F.1_g232380 Hydrangea macrophylla HOM05D001829 ORTHO05D007093 7.7e-29 131.0 74 82.4
VMungo1215G2408 Vigna mungo HOM05D001829 ORTHO05D007093 7.7e-29 131.0 75 80.0
EL10Ac6g14763 Beta vulgaris HOM05D001829 ORTHO05D007093 1.0e-28 130.6 75 85.3
HPP92_012687 Vanilla planifolia HOM05D001829 ORTHO05D007093 1.0e-28 130.6 75 80.0
Carub.0002s0679 Capsella rubella HOM05D001829 ORTHO05D007093 1.3e-28 130.2 75 81.3
CiPaw.06G174800 Carya illinoinensis HOM05D001829 ORTHO05D007093 1.7e-28 129.8 75 80.0
Lj4g0003814 Lotus japonicus HOM05D001829 ORTHO05D007093 1.7e-28 129.8 91 70.3
unitig_748.g8352 Utricularia gibba HOM05D001829 ORTHO05D007093 1.7e-28 129.8 75 82.7
arahy.Tifrunner.gnm1.ann1.CR8E6T Arachis hypogaea HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 80.0
arahy.Tifrunner.gnm1.ann1.Y9RVVK Arachis hypogaea HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 80.0
CARHR054430 Cardamine hirsuta HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 80.0
DCAR_001700 Daucus carota HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 84.0
HanXRQChr06g0182781 Helianthus annuus HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 82.7
SGA_v2.0_scaffold249G44937 Striga asiatica HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 81.3
vmacro01707 Vaccinium macrocarpon HOM05D001829 ORTHO05D007093 2.2e-28 129.4 75 82.7
ATR1136G103 Amborella trichopoda HOM05D001829 ORTHO05D007093 2.9e-28 129.0 75 82.7
Rhsim11G0122000 Rhododendron simsii HOM05D001829 ORTHO05D007093 2.9e-28 129.0 75 82.7
Ciclev10000689m.g Citrus clementina HOM05D001829 ORTHO05D007093 3.8e-28 128.6 75 80.0
MSTRG.16485 Avicennia marina HOM05D001829 ORTHO05D007093 5.0e-28 128.3 75 80.0
Phvul.003G075100 Phaseolus vulgaris HOM05D001829 ORTHO05D007093 5.0e-28 128.3 75 80.0
GSVIVG01023233001 Vitis vinifera HOM05D001829 ORTHO05D007093 5.0e-28 128.3 75 80.0
CSS0044870 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D007093 6.5e-28 127.9 75 81.3
Lsat_1_v5_gn_7_76780 Lactuca sativa HOM05D001829 ORTHO05D007093 6.5e-28 127.9 118 59.3
Sp2g05740 Schrenkiella parvula HOM05D001829 ORTHO05D007093 6.5e-28 127.9 75 80.0
Hund19648 Selenicereus undatus HOM05D001829 ORTHO05D007093 6.5e-28 127.9 75 80.0
TWI59G1485 Tripterygium wilfordii HOM05D001829 ORTHO05D007093 6.5e-28 127.9 75 81.3
AL1G67520 Arabidopsis lyrata HOM05D001829 ORTHO05D007093 8.5e-28 127.5 75 80.0
MD08G1243700 Malus domestica HOM05D001829 ORTHO05D007093 8.5e-28 127.5 74 79.7
Aqoxy6G00078 Aquilegia oxysepala HOM05D001829 ORTHO05D007093 1.1e-27 127.1 75 77.3
AT1G57770 Arabidopsis thaliana HOM05D001829 ORTHO05D007093 1.1e-27 127.1 75 80.0
ECA236G4796 Erigeron canadensis HOM05D001829 ORTHO05D007093 1.1e-27 127.1 118 58.5
Medtr4g134780 Medicago truncatula HOM05D001829 ORTHO05D007093 1.1e-27 127.1 74 82.4
AUR62003301 Chenopodium quinoa HOM05D001829 ORTHO05D007093 1.4e-27 126.7 74 82.4
Glyma.07G273600 Glycine max HOM05D001829 ORTHO05D007093 1.4e-27 126.7 75 78.7
COL.COLO4_17711 Corchorus olitorius HOM05D001829 ORTHO05D007093 1.9e-27 126.3 75 80.0
Lalb_Chr07g0176781 Lupinus albus HOM05D001829 ORTHO05D007093 1.9e-27 126.3 75 80.0
THA.LOC104823701 Tarenaya hassleriana HOM05D001829 ORTHO05D007093 2.5e-27 125.9 75 78.7
AUR62016285 Chenopodium quinoa HOM05D001829 ORTHO05D007093 3.2e-27 125.6 74 81.1
PGR042G0783 Punica granatum HOM05D001829 ORTHO05D007093 3.2e-27 125.6 74 78.4
arahy.Tifrunner.gnm1.ann1.A5KHVE Arachis hypogaea HOM05D001829 ORTHO05D007093 1.0e-25 120.6 75 76.0
arahy.Tifrunner.gnm1.ann1.QGX5EX Arachis hypogaea HOM05D001829 ORTHO05D007093 1.0e-25 120.6 75 76.0
AagrBONN_evm.TU.Sc2ySwM_228.441 Anthoceros agrestis HOM05D001829 ORTHO05D007093 1.4e-25 120.2 76 72.4
Ca_13537_v3 Cicer arietinum L. HOM05D001829 ORTHO05D007093 1.4e-25 120.2 75 80.0
SMO244G0002 Selaginella moellendorffii HOM05D001829 ORTHO05D007093 3.0e-25 119.0 76 72.4
CSS0046505 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D007093 1.5e-24 116.7 79 72.2
Mapoly0102s0041 Marchantia polymorpha HOM05D001829 ORTHO05D007093 1.3e-23 113.6 76 71.1
CBR_g6542 Chara braunii HOM05D001829 ORTHO05D007093 1.4e-19 100.1 74 64.9
CSS0001682 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D007093 7.2e-19 97.8 89 58.4
AUR62027155 Chenopodium quinoa HOM05D001829 ORTHO05D007093 3.6e-18 95.5 59 76.3
Nn5g27486 Nelumbo nucifera HOM05D001829 ORTHO05D007093 6.1e-18 94.7 62 75.8
Pp3c2_2830 Physcomitrium patens HOM05D001829 ORTHO05D007093 2.2e-15 86.3 76 51.3
MCO12G341 Micromonas commoda HOM05D001829 ORTHO05D007093 2.8e-15 85.9 97 48.5
Cre16.g674950 Chlamydomonas reinhardtii HOM05D001829 ORTHO05D007093 1.4e-14 83.6 76 52.6
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 5.3e-14 81.6 74 56.8
PRCOL_00006678 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 1.7e-12 76.6 73 52.1
RcHm_v2.0_Chr3g0485591 Rosa chinensis HOM05D001829 ORTHO05D007093 2.2e-12 76.3 49 71.4
Cre09.g407200 Chlamydomonas reinhardtii HOM05D001829 ORTHO05D007093 3.8e-12 75.5 79 53.2
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 1.1e-11 73.9 75 50.7
PRCOL_00001338 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 1.2e-10 70.5 111 41.4
PRCOL_00004227 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 1.0e-09 67.4 81 43.2
Mapoly0071s0093 Marchantia polymorpha HOM05D001829 ORTHO05D007093 4.0e-09 65.5 49 61.2
MCO16G681 Micromonas commoda HOM05D001829 ORTHO05D007093 8.8e-09 64.3 90 44.4
Actinidia38992 Actinidia chinensis HOM05D001829 ORTHO05D007093 2.6e-08 62.8 73 46.6
Psat4g000880 Pisum sativum HOM05D001829 ORTHO05D007093 3.1e-06 55.8 74 44.6


User provided reference genes

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