Gene: Sopen05g005960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g005960
- Transcript Identifier Sopen05g005960.1
- Gene Type Coding gene
- Location Spenn-ch05 : 4854240-4858781 : negative
Gene Family Information
- ID HOM05D001829
- #Genes/#Species 358/100
- Phylogenetic origin
- ID ORTHO05D007093
- #Genes/#Species 134/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen05g005960.1
Descriptions
- Description FAD/NAD(P)-binding oxidoreductase family protein | FUNCTIONS IN: oxidoreductase activity | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Amine oxidase | BEST Arabidopsis thaliana protein match is: carotenoid isomerase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | ISO | PLAZA Homology (enrichment) | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | HOM05D001829 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001829 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G57770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |