Gene: vmacro01707
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro01707
- Transcript Identifier vmacro01707-RA
- Gene Type Coding gene
- Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 8960824-8967094 : negative
Gene Family Information
- ID HOM05D001829
- #Genes/#Species 358/100
- Phylogenetic origin
- ID ORTHO05D007093
- #Genes/#Species 134/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro01707_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to CRTISO: Prolycopene isomerase, chloroplastic (Daucus carota OX=4039)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | ISO | PLAZA Homology (enrichment) | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | HOM05D001829 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001829 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G57770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |