Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 2.4e-265 918.3 473 100.0
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.8e-191 672.9 498 73.1
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 3.1e-172 609.0 479 70.6
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.9e-125 452.2 240 99.6
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 4.9e-117 425.6 486 50.4
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 6.4e-117 425.2 308 75.6
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.6e-107 394.0 463 49.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 7.8e-107 391.7 475 49.7
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 4.0e-103 379.4 392 55.6
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-100 371.3 479 46.8
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.5e-97 360.9 512 44.5
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 1.1e-95 354.8 484 44.8
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 3.4e-94 349.7 483 43.1
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 6.4e-93 345.5 486 42.8
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 6.0e-91 339.0 471 44.6
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.0e-90 338.2 492 42.9
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.0e-90 338.2 479 45.3
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.7e-90 337.4 474 44.1
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 7.3e-89 332.0 489 43.4
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 9.6e-89 331.6 461 43.8
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.8e-88 330.1 484 44.6
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 3.6e-88 329.7 477 43.0
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 4.0e-87 326.2 474 42.8
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 5.3e-87 325.9 489 41.3
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 6.9e-87 325.5 484 42.6
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 6.9e-87 325.5 471 43.5
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 2.2e-85 320.5 504 42.5
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 8.4e-85 318.5 518 41.1
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 8.4e-85 318.5 489 42.9
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 9.3e-84 315.1 506 41.5
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.2e-83 314.7 490 41.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 6.0e-83 312.4 512 40.2
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.8e-82 310.8 480 41.0
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 3.9e-82 309.7 485 41.4
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 3.9e-82 309.7 469 41.4
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 6.7e-82 308.9 504 41.1
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 6.7e-82 308.9 480 42.5
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.3e-81 306.6 436 42.2
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 3.7e-80 303.1 491 39.7
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.3e-79 299.3 469 39.4
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 9.0e-79 298.5 421 42.3
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.2e-77 293.9 479 39.5
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 8.4e-77 292.0 491 39.9
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 9.3e-76 288.5 453 39.5
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 3.5e-75 286.6 468 38.2
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 7.9e-75 285.4 478 37.7
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.8e-74 284.3 476 38.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 6.7e-74 282.3 384 44.3
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 3.3e-73 280.0 473 37.8
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 3.3e-73 280.0 478 38.9
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 7.4e-73 278.9 493 38.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.3e-72 278.1 468 38.5
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 8.2e-72 275.4 484 38.6
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.8e-71 274.2 479 35.9
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 2.0e-70 270.8 335 49.0
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 3.4e-70 270.0 484 37.6
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 4.5e-70 269.6 474 37.6
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 5.8e-70 269.2 505 36.8
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 2.2e-69 267.3 474 37.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.9e-69 266.9 514 36.2
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.1e-68 265.0 475 37.9
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.9e-68 264.2 353 44.8
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 6.0e-67 259.2 362 44.8
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.5e-65 254.6 333 45.0
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.3e-64 251.5 488 37.3
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 2.2e-64 250.8 375 41.3
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 6.5e-61 239.2 500 36.0
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.7e-59 233.8 479 34.7
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 6.1e-59 232.6 339 44.2
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 2.0e-57 227.6 375 40.3
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.4e-55 221.5 335 40.6
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.2e-53 214.2 336 41.4
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 6.5e-53 212.6 488 32.8
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 3.2e-52 210.3 339 36.6
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.4e-50 204.9 467 35.3
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.0e-49 201.1 509 31.6
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 8.2e-48 195.7 553 31.1
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.5e-46 191.4 481 34.5
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.0e-45 188.7 214 49.1
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.9e-44 184.5 233 45.5
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 3.2e-44 183.7 341 36.1
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 3.0e-42 177.2 353 37.1
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 2.5e-36 157.5 138 59.4
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 3.6e-35 153.7 390 31.8
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 6.3e-32 142.9 202 40.6
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 1.4e-31 141.7 248 36.3
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 1.6e-30 138.3 181 44.2
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.6e-30 138.3 108 60.2
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 2.7e-30 137.5 135 54.8
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.6e-27 128.3 135 51.1
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.8e-26 124.8 171 42.1
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 6.3e-24 116.3 109 55.0
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 9.1e-23 112.5 118 52.5
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.3e-21 107.8 211 35.1
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 3.3e-20 104.0 109 47.7
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 5.5e-20 103.2 145 44.1
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 2.4e-15 87.8 138 36.2
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 3.1e-15 87.4 130 38.5
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 7.0e-15 86.3 153 32.7
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 3.5e-14 84.0 152 40.1
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 1.5e-12 78.6 86 47.7
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 2.5e-12 77.8 409 24.2
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 4.0e-10 70.5 355 20.3
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 4.0e-10 70.5 81 48.1
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 2.6e-09 67.8 97 41.2
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 9.8e-09 65.9 95 43.2
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 1.9e-07 61.6 135 33.3
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.4e-07 60.1 62 53.2
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.5e-06 57.4 85 45.9
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 6.0e-06 56.6 164 25.6


User provided reference genes

Program Settings