Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g054430.1 Solanum lycopersicum HOM05D002762 ORTHO05D004643 2.6e-46 188.3 93 100.0
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 1.8e-44 182.2 89 98.9
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 1.8e-44 182.2 89 98.9
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 1.6e-40 169.1 89 88.8
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 8.3e-37 156.8 91 84.6
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 8.3e-37 156.8 91 84.6
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 2.7e-35 151.8 88 83.0
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 2.5e-33 145.2 89 76.4
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 3.3e-33 144.8 89 76.4
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 5.6e-33 144.1 89 76.4
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 5.6e-33 144.1 87 79.3
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 1.6e-32 142.5 87 74.7
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 2.8e-32 141.7 89 75.3
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 4.7e-32 141.0 87 77.0
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 4.7e-32 141.0 87 77.0
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 6.2e-32 140.6 87 73.6
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 8.1e-32 140.2 87 73.6
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 8.1e-32 140.2 87 73.6
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 1.1e-31 139.8 87 73.6
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 2.3e-31 138.7 87 73.6
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 2.3e-31 138.7 87 75.9
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 5.2e-31 137.5 87 74.7
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 5.2e-31 137.5 87 72.4
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 6.8e-31 137.1 89 69.7
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 6.8e-31 137.1 89 69.7
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 8.9e-31 136.7 87 73.6
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 8.9e-31 136.7 87 70.1
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 2.0e-30 135.6 87 71.3
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 2.6e-30 135.2 87 71.3
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 3.4e-30 134.8 90 71.1
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 4.4e-30 134.4 86 75.6
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 7.5e-30 133.7 89 68.5
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 1.3e-29 132.9 90 68.9
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 1.3e-29 132.9 87 69.0
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 1.7e-29 132.5 89 65.2
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 1.7e-29 132.5 88 69.3
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 1.7e-29 132.5 87 70.1
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 1.7e-29 132.5 86 69.8
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 2.2e-29 132.1 86 68.6
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 2.9e-29 131.7 85 77.6
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 6.4e-29 130.6 86 69.8
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 6.4e-29 130.6 89 66.3
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 8.3e-29 130.2 86 73.3
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.4e-28 129.4 86 68.6
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 1.4e-28 129.4 86 69.8
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 1.9e-28 129.0 83 72.3
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 1.9e-28 129.0 87 67.8
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 3.2e-28 128.3 89 67.4
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 3.2e-28 128.3 83 73.5
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 3.2e-28 128.3 89 65.2
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 3.2e-28 128.3 87 70.1
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 4.1e-28 127.9 83 71.1
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 7.1e-28 127.1 90 65.6
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 7.1e-28 127.1 90 65.6
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 7.1e-28 127.1 89 65.2
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 9.2e-28 126.7 86 68.6
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 9.2e-28 126.7 86 70.9
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 1.2e-27 126.3 89 70.8
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 1.2e-27 126.3 89 69.7
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.2e-27 126.3 89 69.7
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 1.2e-27 126.3 88 70.5
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 1.6e-27 125.9 83 73.5
CARHR222230 Cardamine hirsuta HOM05D002762 ORTHO05D004643 2.1e-27 125.6 86 68.6
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.1e-27 125.6 89 69.7
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 2.1e-27 125.6 90 68.9
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 2.7e-27 125.2 85 69.4
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 2.7e-27 125.2 87 71.3
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 4.6e-27 124.4 88 68.2
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 6.0e-27 124.0 86 68.6
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 6.0e-27 124.0 86 68.6
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 7.8e-27 123.6 89 68.5
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 1.0e-26 123.2 86 68.6
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 1.0e-26 123.2 86 67.4
Cpa.g.c35915 Carica papaya HOM05D002762 ORTHO05D004643 1.0e-26 123.2 90 64.4
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 1.0e-26 123.2 86 68.6
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 1.7e-26 122.5 88 67.0
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 2.3e-26 122.1 86 67.4
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 3.0e-26 121.7 86 66.3
HanXRQChr11g0325861 Helianthus annuus HOM05D002762 ORTHO05D004643 3.9e-26 121.3 86 64.0
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 5.1e-26 120.9 86 67.4
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 6.6e-26 120.6 86 69.8
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 6.6e-26 120.6 87 62.1
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 6.6e-26 120.6 86 64.0
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 8.6e-26 120.2 86 66.3
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 8.6e-26 120.2 86 66.3
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 8.6e-26 120.2 86 69.8
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 1.1e-25 119.8 89 67.4
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 1.5e-25 119.4 87 64.4
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 1.5e-25 119.4 87 64.4
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 3.3e-25 118.2 89 66.3
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 5.6e-25 117.5 92 63.0
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 7.3e-25 117.1 83 66.3
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 1.2e-24 116.3 89 65.2
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 2.1e-24 115.5 87 63.2
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 2.8e-24 115.2 86 64.0
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 1.1e-23 113.2 85 62.4
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 1.4e-23 112.8 83 65.1
CSS0038196 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.1e-23 111.7 87 64.4
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 4.0e-23 111.3 96 58.3
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 5.2e-23 110.9 85 62.4
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 3.4e-22 108.2 84 63.1
HanXRQChr11g0325851 Helianthus annuus HOM05D002762 ORTHO05D004643 4.9e-21 104.4 82 61.0
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 2.5e-17 92.0 89 50.6
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 1.6e-16 89.4 85 47.1
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 2.8e-16 88.6 111 42.3
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 4.0e-15 84.7 85 54.1
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 2.6e-14 82.0 86 52.3
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 1.4e-12 76.3 49 73.5
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 7.1e-12 73.9 87 43.7
Pp3c6_11940 Physcomitrium patens HOM05D002762 ORTHO05D004643 1.0e-10 70.1 84 39.3
Pp3c6_5440 Physcomitrium patens HOM05D002762 ORTHO05D004643 1.3e-10 69.7 88 40.9
Os10g0148800 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 2.8e-08 62.0 82 37.8
arahy.Tifrunner.gnm1.ann1.F7NR6L Arachis hypogaea HOM05D000530 ORTHO05D000621 4.0e-07 58.2 79 36.7


User provided reference genes

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