Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045826.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.0e-31 137.9 70 100.0
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 5.0e-18 94.0 87 65.5
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-18 94.0 87 65.5
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-18 94.0 87 65.5
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-18 94.0 87 65.5
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-18 94.0 87 65.5
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.2e-17 90.1 87 63.2
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.6e-16 89.0 87 62.1
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 2.7e-16 88.2 87 62.1
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.6e-16 87.8 87 62.1
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 6.1e-16 87.0 87 62.1
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.0e-15 86.3 87 60.9
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.4e-15 85.9 87 59.8
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 1.4e-15 85.9 87 59.8
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 3.0e-15 84.7 87 60.9
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 3.0e-15 84.7 87 60.9
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 3.0e-15 84.7 87 60.9
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 3.0e-15 84.7 87 60.9
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 3.9e-15 84.3 87 59.8
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 3.9e-15 84.3 87 59.8
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 5.2e-15 84.0 87 59.8
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 5.2e-15 84.0 87 59.8
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 59.8
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 59.8
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 59.8
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 58.6
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 58.6
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.8e-15 83.2 87 59.8
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 1.5e-14 82.4 87 57.5
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 4.4e-14 80.9 87 58.6
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 4.4e-14 80.9 85 60.0
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 4.4e-14 80.9 74 62.2
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 5.7e-14 80.5 87 58.6
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 7.4e-14 80.1 70 68.6
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 7.4e-14 80.1 72 66.7
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 9.7e-14 79.7 87 57.5
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 9.7e-14 79.7 87 57.5
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.7e-13 79.0 87 57.5
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 1.7e-13 79.0 87 57.5
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 2.4e-12 75.1 42 88.1
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 87 55.2
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 87 55.2
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 87 55.2
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 87 55.2
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 87 55.2
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 7.0e-12 73.6 87 55.2
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 9.1e-12 73.2 44 84.1
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.6e-11 71.6 87 52.9
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.6e-11 71.6 87 52.9
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.9e-11 70.5 41 85.4
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-10 69.3 44 84.1
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.5e-09 65.1 87 51.7
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.2e-09 64.7 85 50.6
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 9.4e-09 63.2 87 50.6
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 9.4e-09 63.2 87 50.6
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 9.4e-09 63.2 87 50.6
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 1.2e-08 62.8 87 50.6
SHI01963 Sapria himalayana HOM05D001987 ORTHO05D006514 2.7e-08 61.6 80 52.5
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 4.7e-08 60.8 87 48.3
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 4.7e-08 60.8 87 48.3
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 3.0e-07 58.2 79 49.4
SHI11171 Sapria himalayana HOM05D001987 ORTHO05D006514 3.0e-07 58.2 56 62.5
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 4.0e-07 57.8 71 50.7
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.5e-06 55.8 83 42.2
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 2.0e-06 55.5 39 69.2
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 2.0e-06 55.5 83 42.2


User provided reference genes

Program Settings