Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.3e-31 138.3 70 100.0
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 7.4e-14 80.1 63 69.8
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 7.4e-14 80.1 63 69.8
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-14 79.7 63 69.8
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-14 79.7 63 69.8
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-14 79.7 63 69.8
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-14 79.7 63 69.8
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-13 79.3 63 68.3
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 1.7e-13 79.0 63 68.3
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 2.8e-13 78.2 63 68.3
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 2.8e-13 78.2 63 68.3
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 4.8e-13 77.4 63 68.3
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 4.8e-13 77.4 63 66.7
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-13 77.0 63 66.7
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 8.2e-13 76.6 63 66.7
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.1e-12 76.3 63 66.7
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.4e-12 75.9 63 66.7
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.4e-12 75.9 63 66.7
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.8e-12 75.5 63 66.7
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.4e-12 75.1 63 65.1
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 3.1e-12 74.7 63 65.1
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 7.0e-12 73.6 58 69.0
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 7.0e-12 73.6 63 65.1
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 9.1e-12 73.2 58 69.0
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 9.1e-12 73.2 63 65.1
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.2e-11 72.8 63 65.1
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 1.6e-11 72.4 65 64.6
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 1.6e-11 72.4 63 63.5
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 2.0e-11 72.0 61 65.6
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 2.0e-11 72.0 61 65.6
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 2.0e-11 72.0 61 65.6
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 2.6e-11 71.6 58 67.2
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.6e-11 71.6 58 67.2
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.6e-11 71.6 58 67.2
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 4.5e-11 70.9 63 63.5
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 5.9e-11 70.5 58 65.5
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 7.7e-11 70.1 63 63.5
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 1.7e-10 68.9 63 60.3
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 2.2e-10 68.6 59 64.4
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 2.2e-10 68.6 63 61.9
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.9e-10 68.2 77 53.2
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 70 55.7
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.8e-10 67.8 39 82.1
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.8e-10 67.8 39 82.1
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 6.5e-10 67.0 63 60.3
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 6.5e-10 67.0 63 60.3
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.5e-09 65.1 61 57.4
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 3.2e-09 64.7 63 60.3
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 1.6e-08 62.4 39 76.9
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.7e-08 61.6 63 60.3
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.6e-08 61.2 39 74.4
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 4.7e-08 60.8 61 57.4
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 6.1e-08 60.5 35 80.0
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.4e-07 59.3 64 53.1
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.4e-07 59.3 65 60.0
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 8.8e-07 56.6 63 57.1
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 2.6e-06 55.1 35 74.3


User provided reference genes

Program Settings