Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g051400.2 Solanum lycopersicum HOM05D006162 ORTHO05D007627 1.3e-94 349.7 174 100.0
Sopen04g022820 Solanum pennellii HOM05D006162 ORTHO05D007627 1.5e-60 236.5 121 97.5
Nitab4.5_0005242g0040 Nicotiana tabacum HOM05D006162 ORTHO05D007627 4.0e-40 168.7 126 74.6
Nitab4.5_0000184g0020 Nicotiana tabacum HOM05D006162 ORTHO05D007627 2.0e-39 166.4 126 73.8
CAN.G452.13 Capsicum annuum HOM05D006162 ORTHO05D007627 1.1e-37 160.6 126 65.9
Nitab4.5_0007426g0010 Nicotiana tabacum HOM05D006162 ORTHO05D007627 3.1e-37 159.1 123 73.2
Peaxi162Scf00025g03225 Petunia axillaris HOM05D006162 ORTHO05D007627 1.4e-32 143.7 125 68.0
Lsat_1_v5_gn_2_67341 Lactuca sativa HOM05D006162 ORTHO05D007627 7.0e-21 104.8 140 45.0
HanXRQChr14g0446061 Helianthus annuus HOM05D006162 ORTHO05D007627 4.5e-20 102.1 142 45.8
Cc07_g16680 Coffea canephora HOM05D006162 ORTHO05D007627 3.3e-18 95.9 136 48.5
CSS0015273 Camellia sinensis var. sinensis HOM05D006162 ORTHO05D007627 4.3e-18 95.5 143 42.7
vmacro18056 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 5.6e-18 95.1 140 42.9
Rhsim08G0004700 Rhododendron simsii HOM05D006162 ORTHO05D007627 7.3e-18 94.7 129 47.3
CAN.G212.11 Capsicum annuum HOM05D006162 ORTHO05D007627 9.5e-18 94.4 85 56.5
AUR62003642 Chenopodium quinoa HOM05D006162 ORTHO05D007627 8.0e-17 91.3 136 45.6
AUR62017952 Chenopodium quinoa HOM05D006162 ORTHO05D007627 1.4e-16 90.5 131 46.6
MD01G1015800 Malus domestica HOM05D006162 ORTHO05D007627 1.4e-16 90.5 128 45.3
Cpa.g.sc72.50 Carica papaya HOM05D006162 ORTHO05D007627 1.8e-16 90.1 126 43.7
Dinv05774 Davidia involucrata HOM05D006162 ORTHO05D007627 3.0e-16 89.4 143 41.3
Ciclev10025253m.g Citrus clementina HOM05D006162 ORTHO05D007627 5.2e-16 88.6 131 44.3
Ah.02g123760 Amaranthus hybridus HOM05D006162 ORTHO05D007627 1.5e-15 87.0 132 42.4
THA.LOC104824832 Tarenaya hassleriana HOM05D006162 ORTHO05D007627 2.0e-15 86.7 132 39.4
FvH4_1g23260 Fragaria vesca HOM05D006162 ORTHO05D007627 3.4e-15 85.9 123 40.7
Prupe.6G165900 Prunus persica HOM05D006162 ORTHO05D007627 3.4e-15 85.9 128 43.0
SGA_v2.0_scaffold2G01268 Striga asiatica HOM05D006162 ORTHO05D007627 7.5e-15 84.7 137 45.3
TAR625G0476 Trochodendron aralioides HOM05D006162 ORTHO05D007627 9.8e-15 84.3 137 39.4
QL06p031367 Quercus lobata HOM05D006162 ORTHO05D007627 1.3e-14 84.0 131 41.2
CiPaw.03G131500 Carya illinoinensis HOM05D006162 ORTHO05D007627 1.7e-14 83.6 126 42.9
Aa31LG6G15910 Aethionema arabicum HOM05D006162 ORTHO05D007627 2.2e-14 83.2 119 44.5
Thhalv10025021m.g Eutrema salsugineum HOM05D006162 ORTHO05D007627 2.2e-14 83.2 105 48.6
CARHR247340 Cardamine hirsuta HOM05D006162 ORTHO05D007627 2.9e-14 82.8 99 47.5
PSO675G6781 Papaver somniferum HOM05D006162 ORTHO05D007627 3.7e-14 82.4 142 38.7
RcHm_v2.0_Chr2g0118111 Rosa chinensis HOM05D006162 ORTHO05D007627 3.7e-14 82.4 124 45.2
COL.COLO4_17421 Corchorus olitorius HOM05D000398 ORTHO05D007627 6.4e-14 81.6 148 39.9
PSO541G4150 Papaver somniferum HOM05D006162 ORTHO05D007627 6.4e-14 81.6 142 36.6
PGR102G2965 Punica granatum HOM05D006162 ORTHO05D007627 6.4e-14 81.6 126 45.2
Sp7g36490 Schrenkiella parvula HOM05D006162 ORTHO05D007627 6.4e-14 81.6 99 48.5
Hund19624 Selenicereus undatus HOM05D006162 ORTHO05D007627 6.4e-14 81.6 144 43.8
EL10Ac6g15232 Beta vulgaris HOM05D006162 ORTHO05D007627 8.3e-14 81.3 128 42.2
FAN28G1724 Fragaria x ananassa HOM05D006162 ORTHO05D007627 8.3e-14 81.3 127 44.9
Aqoxy6G00404 Aquilegia oxysepala HOM05D006162 ORTHO05D007627 1.4e-13 80.5 106 45.3
Lj4A860G2 Lonicera japonica HOM05D006162 ORTHO05D007627 1.8e-13 80.1 151 39.7
Cfa002788 Carpinus fangiana HOM05D006162 ORTHO05D007627 2.4e-13 79.7 127 40.9
Manes.12G145600 Manihot esculenta HOM05D006162 ORTHO05D007627 2.4e-13 79.7 138 37.0
AT4G39370 Arabidopsis thaliana HOM05D006162 ORTHO05D007627 3.2e-13 79.3 101 46.5
FAN23G1837 Fragaria x ananassa HOM05D006162 ORTHO05D007627 3.2e-13 79.3 125 43.2
Gohir.D13G156100 Gossypium hirsutum HOM05D006162 ORTHO05D007627 3.2e-13 79.3 152 35.5
Gorai.013G176700 Gossypium raimondii HOM05D006162 ORTHO05D007627 3.2e-13 79.3 152 35.5
Sabra07G0065000 Salix brachista HOM05D006162 ORTHO05D007627 3.2e-13 79.3 124 40.3
Potri.007G077100 Populus trichocarpa HOM05D006162 ORTHO05D007627 4.1e-13 79.0 114 43.0
Carub.0007s0129 Capsella rubella HOM05D006162 ORTHO05D007627 7.0e-13 78.2 99 45.5
Migut.H02454 Erythranthe guttata HOM05D006162 ORTHO05D007627 7.0e-13 78.2 98 50.0
Haze_25085 Corylus avellana HOM05D006162 ORTHO05D007627 1.2e-12 77.4 126 40.5
Atru.chr4.714 Acer truncatum HOM05D006162 ORTHO05D007627 2.0e-12 76.6 138 38.4
CANSAT01G0187 Cannabis sativa HOM05D006162 ORTHO05D007627 2.7e-12 76.3 129 40.3
Ca_17673_v3 Cicer arietinum L. HOM05D006162 ORTHO05D007627 3.5e-12 75.9 115 40.9
Psat7g049400 Pisum sativum HOM05D006162 ORTHO05D007627 3.5e-12 75.9 108 40.7
Gohir.A13G151700 Gossypium hirsutum HOM05D006162 ORTHO05D007627 4.6e-12 75.5 152 34.9
AL7G11390 Arabidopsis lyrata HOM05D006162 ORTHO05D007627 6.0e-12 75.1 114 43.0
BcaC01g00286 Brassica carinata HOM05D006162 ORTHO05D007627 6.0e-12 75.1 102 42.2
A08p23610 Brassica napus HOM05D006162 ORTHO05D007627 6.0e-12 75.1 109 41.3
BolC3t20037H Brassica oleracea HOM05D006162 ORTHO05D007627 6.0e-12 75.1 102 42.2
BraA08t34318Z Brassica rapa HOM05D006162 ORTHO05D007627 6.0e-12 75.1 109 41.3
Thecc.07G145700 Theobroma cacao HOM05D006162 ORTHO05D007627 6.0e-12 75.1 126 39.7
Lalb_Chr13g0296311 Lupinus albus HOM05D006162 ORTHO05D007627 7.8e-12 74.7 145 37.2
DCAR_011465 Daucus carota HOM05D006162 ORTHO05D007627 1.0e-11 74.3 118 41.5
ECA238G0813 Erigeron canadensis HOM05D006162 ORTHO05D007627 1.0e-11 74.3 60 61.7
Hma1.2p1_0220F.1_g092940 Hydrangea macrophylla HOM05D006162 ORTHO05D007627 1.7e-11 73.6 71 53.5
Eucgr.H04890 Eucalyptus grandis HOM05D006162 ORTHO05D007627 2.3e-11 73.2 110 43.6
Glyma.08G145100 Glycine max HOM05D006162 ORTHO05D007627 3.0e-11 72.8 114 40.4
C03p77810 Brassica napus HOM05D006162 ORTHO05D007627 3.9e-11 72.4 105 40.0
Medtr8g092350 Medicago truncatula HOM05D006162 ORTHO05D007627 3.9e-11 72.4 133 33.8
BcaB03g12289 Brassica carinata HOM05D006162 ORTHO05D007627 5.0e-11 72.0 107 43.9
Sc16g0004080 Simmondsia chinensis HOM05D006162 ORTHO05D007627 5.0e-11 72.0 102 48.0
CsaV3_2G017830 Cucumis sativus L. HOM05D006162 ORTHO05D007627 6.6e-11 71.6 126 36.5
TWI79G1464 Tripterygium wilfordii HOM05D006162 ORTHO05D007627 1.1e-10 70.9 142 35.2
ClCG02G000880 Citrullus lanatus HOM05D006162 ORTHO05D007627 1.5e-10 70.5 129 40.3
Glyma.05G186500 Glycine max HOM05D006162 ORTHO05D007627 1.9e-10 70.1 110 40.9
TPR.G2184 Trifolium pratense HOM05D006162 ORTHO05D007627 1.9e-10 70.1 83 42.2
Lj4g0017392 Lotus japonicus HOM05D006162 ORTHO05D007627 3.3e-10 69.3 115 39.1
Nn5g27123 Nelumbo nucifera HOM05D006162 ORTHO05D007627 3.3e-10 69.3 115 41.7
unitig_899.g14618 Utricularia gibba HOM05D006162 ORTHO05D007627 3.3e-10 69.3 109 40.4
GSVIVG01022265001 Vitis vinifera HOM05D006162 ORTHO05D007627 3.3e-10 69.3 59 57.6
MBI17_g27203_MAGBIO Magnolia biondii HOM05D006162 ORTHO05D007627 9.5e-10 67.8 100 43.0
Phvul.002G267600 Phaseolus vulgaris HOM05D006162 ORTHO05D007627 9.5e-10 67.8 104 41.3
SEGI_22619 Sequoiadendron giganteum HOM05D006162 ORTHO05D007627 9.5e-10 67.8 114 37.7
Os04g0429200 Oryza sativa ssp. japonica HOM05D006162 ORTHO05D007627 1.2e-09 67.4 81 44.4
VMungo0251G2144 Vigna mungo HOM05D006162 ORTHO05D007627 1.6e-09 67.0 104 41.3
Zm00001eb082910 Zea mays HOM05D006162 ORTHO05D007627 2.8e-09 66.2 134 35.1
Sed0011946 Sechium edule HOM05D006162 ORTHO05D007627 3.6e-09 65.9 117 41.0
arahy.Tifrunner.gnm1.ann1.QP02N2 Arachis hypogaea HOM05D006162 ORTHO05D007627 8.0e-09 64.7 122 35.2
ATR0584G096 Amborella trichopoda HOM05D006162 ORTHO05D007627 1.1e-08 64.3 59 50.8
arahy.Tifrunner.gnm1.ann1.2PK97N Arachis hypogaea HOM05D006162 ORTHO05D007627 1.1e-08 64.3 122 35.2
Zm00001eb159190 Zea mays HOM05D006162 ORTHO05D007627 3.1e-08 62.8 100 39.0
Mapoly0008s0182 Marchantia polymorpha HOM05D006162 ORTHO05D007627 3.4e-07 59.3 78 44.9
SMO340G0295 Selaginella moellendorffii HOM05D006162 ORTHO05D007627 9.8e-07 57.8 60 51.7
Pp3c18_18540 Physcomitrium patens HOM05D006162 ORTHO05D007627 2.2e-06 56.6 64 45.3


User provided reference genes

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