Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g005200.4 Solanum lycopersicum HOM05D003438 ORTHO05D004235 9.7e-141 503.4 248 100.0
Sopen04g001190 Solanum pennellii HOM05D003438 ORTHO05D004235 7.6e-138 493.8 248 98.0
PGSC0003DMG400001917 Solanum tuberosum HOM05D003438 ORTHO05D004235 1.8e-131 472.6 248 94.0
CAN.G263.2 Capsicum annuum HOM05D003438 ORTHO05D004235 4.8e-124 448.0 248 89.5
Nitab4.5_0000591g0100 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.2e-119 433.3 248 86.3
Nitab4.5_0000149g0230 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.5e-117 426.4 249 84.7
Peaxi162Scf00396g01316 Petunia axillaris HOM05D003438 ORTHO05D004235 2.1e-111 406.0 243 81.1
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 1.5e-77 293.5 244 59.0
SalBow8G3833 Salvia bowleyana HOM05D003438 ORTHO05D004235 5.8e-77 291.6 245 57.1
Cfa008813 Carpinus fangiana HOM05D003438 ORTHO05D004235 6.4e-76 288.1 253 57.7
Atru.chr11.1518 Acer truncatum HOM05D003438 ORTHO05D004235 5.4e-75 285.0 254 58.3
Ciclev10030492m.g Citrus clementina HOM05D003438 ORTHO05D004235 7.0e-75 284.6 253 56.5
Oeu027415.2 Olea europaea HOM05D003438 ORTHO05D004235 1.2e-74 283.9 242 58.7
Haze_11830 Corylus avellana HOM05D003438 ORTHO05D004235 2.1e-74 283.1 255 56.9
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 2.1e-74 283.1 245 58.0
Migut.L01140 Erythranthe guttata HOM05D003438 ORTHO05D004235 7.8e-74 281.2 243 57.6
GSVIVG01010139001 Vitis vinifera HOM05D003438 ORTHO05D004235 7.8e-74 281.2 256 56.2
DCAR_023734 Daucus carota HOM05D003438 ORTHO05D004235 1.3e-73 280.4 247 57.5
Glyma.15G276800 Glycine max HOM05D003438 ORTHO05D004235 3.9e-73 278.9 248 55.2
Cc11_g11330 Coffea canephora HOM05D003438 ORTHO05D004235 8.6e-73 277.7 246 56.5
MD16G1052600 Malus domestica HOM05D003438 ORTHO05D004235 1.5e-72 276.9 250 56.8
CSS0014289 Camellia sinensis var. sinensis HOM05D003438 ORTHO05D004235 1.9e-72 276.6 246 57.7
Prupe.1G298000 Prunus persica HOM05D003438 ORTHO05D004235 1.2e-71 273.9 250 57.6
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea HOM05D003438 ORTHO05D004235 1.6e-71 273.5 246 55.7
EL10Ac6g14628 Beta vulgaris HOM05D003438 ORTHO05D004235 2.8e-71 272.7 247 54.7
TWI75G0189 Tripterygium wilfordii HOM05D003438 ORTHO05D004235 3.6e-71 272.3 247 57.9
SGA_v2.0_scaffold16G07841 Striga asiatica HOM05D003438 ORTHO05D004235 1.4e-70 270.4 241 57.3
vmacro10455 Vaccinium macrocarpon HOM05D003438 ORTHO05D004235 3.1e-70 269.2 248 55.2
Sed0018972 Sechium edule HOM05D003438 ORTHO05D004235 4.0e-70 268.9 248 55.6
Potri.010G135500 Populus trichocarpa HOM05D003438 ORTHO05D004235 1.2e-69 267.3 247 56.3
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 1.5e-69 266.9 245 55.1
Sabra10G0104100 Salix brachista HOM05D003438 ORTHO05D004235 2.0e-69 266.5 247 56.3
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 5.8e-69 265.0 254 52.0
Duzib251G0072 Durio zibethinus HOM05D003438 ORTHO05D004235 7.5e-69 264.6 251 53.8
Lj4g0011234 Lotus japonicus HOM05D003438 ORTHO05D004235 9.9e-69 264.2 246 54.1
CsaV3_5G033620 Cucumis sativus L. HOM05D003438 ORTHO05D004235 1.3e-68 263.8 250 53.6
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 1.7e-68 263.5 253 54.5
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea HOM05D003438 ORTHO05D004235 2.9e-68 262.7 238 55.5
PGR119G1138 Punica granatum HOM05D003438 ORTHO05D004235 2.9e-68 262.7 244 52.9
Manes.14G092500 Manihot esculenta HOM05D003438 ORTHO05D004235 3.7e-68 262.3 251 53.8
FAN12G2600 Fragaria x ananassa HOM05D003438 ORTHO05D004235 4.9e-68 261.9 253 54.2
MELO3C012178.2 Cucumis melo HOM05D003438 ORTHO05D004235 6.4e-68 261.5 250 52.8
TAR629G1044 Trochodendron aralioides HOM05D003438 ORTHO05D004235 1.1e-67 260.8 250 53.2
FAN17G0827 Fragaria x ananassa HOM05D003438 ORTHO05D004235 3.2e-67 259.2 253 53.8
RcHm_v2.0_Chr4g0436941 Rosa chinensis HOM05D003438 ORTHO05D004235 5.4e-67 258.5 253 53.0
PSO478G2917 Papaver somniferum HOM05D003438 ORTHO05D004235 7.1e-67 258.1 248 51.2
Aa31sc12G150 Aethionema arabicum HOM05D003438 ORTHO05D004235 9.2e-67 257.7 249 51.4
Eucgr.G02402 Eucalyptus grandis HOM05D003438 ORTHO05D004235 9.2e-67 257.7 254 52.4
ATR0691G173 Amborella trichopoda HOM05D003438 ORTHO05D004235 1.2e-66 257.3 246 53.7
HanXRQChr16g0528311 Helianthus annuus HOM05D003438 ORTHO05D004235 1.2e-66 257.3 247 52.2
FAN07G2974 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.1e-66 256.5 253 52.6
Actinidia07752 Actinidia chinensis HOM05D003438 ORTHO05D004235 2.7e-66 256.1 233 56.2
THA.LOC104821983 Tarenaya hassleriana HOM05D003438 ORTHO05D004235 2.7e-66 256.1 249 53.4
AUR62003034 Chenopodium quinoa HOM05D003438 ORTHO05D004235 6.0e-66 255.0 243 53.1
Nn4g23588 Nelumbo nucifera HOM05D003438 ORTHO05D004235 6.0e-66 255.0 243 53.9
Gohir.D02G132466 Gossypium hirsutum HOM05D003438 ORTHO05D004235 7.8e-66 254.6 244 53.3
Carub.0002s1552 Capsella rubella HOM05D003438 ORTHO05D004235 1.0e-65 254.2 244 53.3
CARHR061750 Cardamine hirsuta HOM05D003438 ORTHO05D004235 1.3e-65 253.8 248 52.4
Gohir.A03G107400 Gossypium hirsutum HOM05D003438 ORTHO05D004235 1.3e-65 253.8 244 53.3
Gorai.005G148400 Gossypium raimondii HOM05D003438 ORTHO05D004235 1.3e-65 253.8 244 53.3
PSO017G4740 Papaver somniferum HOM05D003438 ORTHO05D004235 1.3e-65 253.8 248 50.8
ECA234G3211 Erigeron canadensis HOM05D003438 ORTHO05D004235 1.7e-65 253.4 245 51.4
Thhalv10017999m.g Eutrema salsugineum HOM05D003438 ORTHO05D004235 1.7e-65 253.4 249 51.8
Cpa.g.sc53.1 Carica papaya HOM05D003438 ORTHO05D004235 2.3e-65 253.1 250 54.4
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 2.3e-65 253.1 243 51.0
CDE02G1987 Ceratophyllum demersum HOM05D003438 ORTHO05D004235 3.0e-65 252.7 250 53.2
Ah.12g061010 Amaranthus hybridus HOM05D003438 ORTHO05D004235 3.9e-65 252.3 242 52.9
Rhsim09G0118400 Rhododendron simsii HOM05D003438 ORTHO05D004235 3.9e-65 252.3 248 52.8
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 8.6e-65 251.1 243 53.9
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 1.5e-64 250.4 201 62.7
Sc04g0007220 Simmondsia chinensis HOM05D003438 ORTHO05D004235 2.5e-64 249.6 242 52.9
A02p15460 Brassica napus HOM05D003438 ORTHO05D004235 5.6e-64 248.4 248 51.6
BraA02t06607Z Brassica rapa HOM05D003438 ORTHO05D004235 5.6e-64 248.4 248 51.6
BcaB05g24430 Brassica carinata HOM05D003438 ORTHO05D004235 9.5e-64 247.7 249 51.8
COL.COLO4_27762 Corchorus olitorius HOM05D003438 ORTHO05D004235 2.1e-63 246.5 240 52.5
AT1G68890 Arabidopsis thaliana HOM05D003438 ORTHO05D004235 2.8e-63 246.1 249 50.2
Sp5g24020 Schrenkiella parvula HOM05D003438 ORTHO05D004235 4.7e-63 245.4 249 50.2
CANSAT64G0670 Cannabis sativa HOM05D003438 ORTHO05D004235 8.1e-63 244.6 255 49.4
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 1.1e-62 244.2 249 50.6
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 6.8e-62 241.5 249 50.2
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 2.0e-61 240.0 244 48.4
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 5.4e-59 231.9 243 48.6
Zm00001eb245370 Zea mays HOM05D003438 ORTHO05D004235 6.0e-58 228.4 247 47.4
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 1.7e-57 226.9 202 54.0
SEGI_33974 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 6.6e-57 224.9 270 41.5
Psat4g113520 Pisum sativum HOM05D003438 ORTHO05D004235 1.3e-52 210.7 210 51.9
Hma1.2p1_0762F.1_g214440 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 2.4e-51 206.5 168 58.9
Hma1.2p1_0762F.1_g214450 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 2.4e-51 206.5 168 58.9
Ca_22508_v3 Cicer arietinum L. HOM05D003438 ORTHO05D004235 1.7e-49 200.3 167 60.5
QL03p047145 Quercus lobata HOM05D003438 ORTHO05D004235 2.3e-49 199.9 168 57.7
MSTRG.795 Avicennia marina HOM05D003438 ORTHO05D004235 9.6e-48 194.5 167 59.3
Lj3C1025G4 Lonicera japonica HOM05D003438 ORTHO05D004235 9.6e-48 194.5 253 45.5
SMO270G0066 Selaginella moellendorffii HOM05D003438 ORTHO05D004235 1.6e-47 193.7 250 43.2
Gohir.A13G089245 Gossypium hirsutum HOM05D003438 ORTHO05D004235 1.4e-46 190.7 172 53.5
ClCG05G023390 Citrullus lanatus HOM05D003438 ORTHO05D004235 4.0e-46 189.1 174 55.7
Lalb_Chr16g0392021 Lupinus albus HOM05D003438 ORTHO05D004235 5.3e-46 188.7 167 55.7
VMungo1080G0632 Vigna mungo HOM05D003438 ORTHO05D004235 1.7e-44 183.7 165 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2269 Anthoceros agrestis HOM05D003438 ORTHO05D004235 1.9e-43 180.3 199 49.7
MBI14_g11750_MAGBIO Magnolia biondii HOM05D003438 ORTHO05D004235 7.1e-43 178.3 168 54.2
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 7.1e-43 178.3 200 46.5
Mapoly0195s0004 Marchantia polymorpha HOM05D003438 ORTHO05D004235 4.6e-42 175.6 293 36.2
Aqoxy3G00578 Aquilegia oxysepala HOM05D005717 ORTHO05D004235 4.8e-39 165.6 172 52.9
Nitab4.5_0002491g0050 Nicotiana tabacum HOM05D003438 ORTHO05D004235 6.4e-36 155.2 111 75.7
Rhsim13G0143500 Rhododendron simsii HOM05D003438 ORTHO05D004235 8.7e-33 144.8 160 47.5
HPP92_019403 Vanilla planifolia HOM05D003438 ORTHO05D004235 3.9e-25 119.4 118 47.5
MCO05G676 Micromonas commoda HOM05D003438 ORTHO05D004235 2.5e-24 116.7 273 30.4
HPP92_019404 Vanilla planifolia HOM05D003438 ORTHO05D004235 2.5e-24 116.7 130 46.2
Nitab4.5_0002491g0040 Nicotiana tabacum HOM05D016139 ORTHO05D014242 2.2e-23 113.6 63 81.0
SEGI_27375 Sequoiadendron giganteum HOM05D003438 ORTHO05D004235 1.8e-22 110.5 148 37.2
Cre16.g659050 Chlamydomonas reinhardtii HOM05D003438 ORTHO05D004235 8.8e-17 91.7 271 26.9
CBR_g48056 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-15 87.0 138 37.0
Lalb_Chr16g0392011 Lupinus albus HOM05D003438 ORTHO05D004235 2.4e-14 83.6 77 49.4
PRCOL_00004179 Prasinoderma coloniale HOM05D003438 ORTHO05D004235 1.9e-11 73.9 267 28.8


User provided reference genes

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