Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.8e-64 248.1 129 100.0
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 3.8e-64 248.1 129 100.0
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 3.8e-64 248.1 129 100.0
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.4e-61 239.6 129 96.9
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.3e-61 238.8 126 97.6
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.3e-61 238.8 126 97.6
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 3.0e-61 238.4 125 97.6
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 8.8e-61 236.9 126 96.8
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.0e-56 223.4 126 89.7
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 1.0e-56 223.4 126 88.9
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.7e-56 222.6 126 88.9
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.7e-56 222.6 126 88.9
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 2.2e-56 222.2 129 88.4
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 6.5e-56 220.7 127 90.6
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.1e-55 219.9 126 88.1
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.4e-55 219.5 126 88.1
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 3.2e-55 218.4 126 86.5
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.2e-55 218.0 128 86.7
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.2e-54 216.5 126 84.9
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.2e-54 216.5 126 88.9
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.6e-54 216.1 128 86.7
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.6e-54 216.1 126 84.1
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 2.3e-53 212.2 128 84.4
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 3.9e-53 211.5 133 82.0
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 8.8e-53 210.3 126 86.5
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.1e-52 209.9 126 83.3
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 1.5e-52 209.5 126 82.5
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 2.0e-52 209.1 125 86.4
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.6e-52 208.8 126 83.3
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 3.3e-52 208.4 126 82.5
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 5.7e-52 207.6 126 82.5
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.3e-51 206.5 126 81.7
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 1.3e-51 206.5 147 74.1
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 1.7e-51 206.1 130 83.1
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.8e-51 205.3 126 81.7
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 3.7e-51 204.9 126 81.0
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 4.8e-51 204.5 126 81.0
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.1e-50 203.4 130 81.5
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 1.1e-50 203.4 126 80.2
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.1e-50 203.4 129 80.6
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 3.1e-50 201.8 127 81.1
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 3.1e-50 201.8 130 80.0
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 3.1e-50 201.8 124 79.0
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 3.1e-50 201.8 126 80.2
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 4.1e-50 201.4 124 79.8
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 5.3e-50 201.1 127 80.3
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 7.0e-50 200.7 124 79.8
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 7.0e-50 200.7 130 80.0
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 7.0e-50 200.7 140 76.4
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 2.0e-49 199.1 128 79.7
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 2.0e-49 199.1 124 78.2
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.6e-49 198.7 129 78.3
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 4.5e-49 198.0 127 80.3
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 5.9e-49 197.6 127 80.3
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 7.7e-49 197.2 124 78.2
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 7.7e-49 197.2 128 78.9
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 1.0e-48 196.8 126 81.7
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 2.9e-48 195.3 124 79.0
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 2.9e-48 195.3 124 79.0
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 5.0e-48 194.5 124 77.4
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 5.0e-48 194.5 124 78.2
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-47 193.4 124 77.4
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 1.5e-47 193.0 124 76.6
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.9e-47 192.6 124 76.6
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 2.5e-47 192.2 128 77.3
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 3.2e-47 191.8 127 74.8
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.2e-47 191.8 126 78.6
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 3.2e-47 191.8 126 81.7
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 5.5e-47 191.0 124 75.8
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 7.2e-47 190.7 124 75.8
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 1.2e-46 189.9 124 75.8
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 1.2e-46 189.9 129 74.4
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 2.1e-46 189.1 124 77.4
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 2.7e-46 188.7 122 76.2
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 4.7e-46 188.0 124 74.2
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 4.7e-46 188.0 129 73.6
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.0e-45 186.8 124 74.2
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.0e-45 186.8 126 75.4
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.4e-45 186.4 126 75.4
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.8e-45 186.0 129 76.7
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 2.3e-45 185.7 130 73.1
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 2.3e-45 185.7 122 76.2
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 2.3e-45 185.7 130 73.1
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 5.2e-45 184.5 127 73.2
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 5.2e-45 184.5 124 72.6
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 8.8e-45 183.7 126 74.6
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 1.2e-44 183.3 127 74.0
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 1.2e-44 183.3 164 62.2
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 1.5e-44 183.0 126 71.4
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 2.0e-44 182.6 126 73.8
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 2.6e-44 182.2 126 73.8
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.6e-44 182.2 126 73.8
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 3.3e-44 181.8 124 72.6
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 5.7e-44 181.0 131 71.0
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 9.7e-44 180.3 107 83.2
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 1.3e-43 179.9 122 73.8
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 2.2e-43 179.1 124 70.2
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 6.3e-43 177.6 108 80.6
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.4e-42 176.4 121 70.2
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 1.0e-40 170.2 125 68.8
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.0e-40 170.2 125 68.8
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.0e-40 170.2 125 68.8
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 1.7e-40 169.5 124 68.5
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 2.2e-40 169.1 126 68.3
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.9e-40 168.7 159 61.0
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 3.8e-40 168.3 105 77.1
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 1.1e-39 166.8 117 70.1
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 1.5e-39 166.4 125 67.2
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 1.9e-39 166.0 125 72.8
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 2.5e-39 165.6 125 68.0
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 3.2e-39 165.2 117 71.8
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 5.5e-39 164.5 122 68.0
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 7.2e-39 164.1 126 64.3
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 7.2e-39 164.1 126 64.3
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 7.2e-39 164.1 167 53.9
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 9.4e-39 163.7 122 66.4
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.6e-38 162.9 125 68.0
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 2.7e-38 162.2 110 70.9
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 2.7e-38 162.2 117 72.6
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 4.7e-38 161.4 120 67.5
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 4.7e-38 161.4 124 65.3
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 6.1e-38 161.0 92 83.7
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.0e-37 160.2 104 76.0
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.0e-37 160.2 113 70.8
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.4e-37 159.8 128 64.1
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.2e-36 156.8 109 68.8
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.0e-36 156.0 114 66.7
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.0e-36 156.0 89 85.4
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.4e-36 155.2 126 63.5
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 4.4e-36 154.8 110 66.4
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 2.8e-35 152.1 159 54.1
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 3.7e-35 151.8 96 78.1
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 3.7e-35 151.8 129 59.7
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 9.1e-34 147.1 93 79.6
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 4.5e-33 144.8 101 68.3
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 1.3e-32 143.3 87 78.2
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 4.2e-31 138.3 79 87.3
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 5.5e-31 137.9 90 73.3
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.6e-30 136.3 124 60.5
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 4.7e-30 134.8 123 57.7
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 6.1e-30 134.4 84 83.3
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.0e-29 133.7 124 60.5
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 5.2e-29 131.3 78 84.6
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 8.8e-29 130.6 81 79.0
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.8e-25 117.5 95 65.3
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 8.6e-24 114.0 105 53.3
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 1.5e-23 113.2 73 74.0
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.5e-23 113.2 92 62.0
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 1.5e-23 113.2 63 81.0
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 2.5e-23 112.5 69 78.3
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.3e-21 105.9 56 91.1
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 3.7e-19 98.6 124 49.2
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 3.2e-18 95.5 103 43.7
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 4.1e-18 95.1 52 88.5
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.7e-16 89.7 89 48.3
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 1.4e-13 80.1 110 42.7
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 8.3e-11 70.9 47 72.3
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.0e-10 67.8 65 56.9
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 2.0e-09 66.2 93 34.4
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.0e-09 64.7 35 88.6


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