Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g030540.2 Solanum lycopersicum HOM05D000002 ORTHO05D023150 5.3e-51 204.1 109 100.0
Sopen02g011060 Solanum pennellii HOM05D000002 ORTHO05D023150 8.5e-41 170.2 109 86.2
Sopen10g012610 Solanum pennellii HOM05D000002 ORTHO05D023150 9.8e-29 130.2 78 88.5
Solyc02g030580.1 Solanum lycopersicum HOM05D000002 ORTHO05D023150 3.7e-28 128.3 78 85.9
Solyc02g032760.1 Solanum lycopersicum HOM05D000002 ORTHO05D023150 3.5e-26 121.7 84 82.1
Solyc02g032740.1 Solanum lycopersicum HOM05D000002 ORTHO05D023150 3.3e-24 115.2 81 80.2
Sopen00g002810 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-24 114.4 73 84.9
Sopen10g022000 Solanum pennellii HOM05D000622 ORTHO05D000475 9.5e-24 113.6 77 80.5
Sopen01g024540 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-23 110.9 64 90.6
Sopen00g003130 Solanum pennellii HOM05D000622 ORTHO05D000475 3.0e-22 108.6 73 82.2
Solyc01g059750.1 Solanum lycopersicum HOM05D000002 ORTHO05D026171 4.0e-22 108.2 77 76.6
Solyc02g066830.4 Solanum lycopersicum HOM05D000622 ORTHO05D000475 4.0e-22 108.2 73 82.2
Sopen02g016060 Solanum pennellii HOM05D000622 ORTHO05D000475 4.4e-21 104.8 73 79.5
Nitab4.5_0002957g0020 Nicotiana tabacum HOM05D000622 ORTHO05D000475 1.8e-19 99.4 73 75.3
CAN.G1130.11 Capsicum annuum HOM05D000622 ORTHO05D000475 2.4e-19 99.0 73 76.7
Solyc02g030490.2 Solanum lycopersicum HOM05D000622 ORTHO05D000475 9.2e-19 97.1 68 79.4
Nitab4.5_0000212g0280 Nicotiana tabacum HOM05D000622 ORTHO05D000475 1.2e-18 96.7 78 69.2
Solyc02g032770.1 Solanum lycopersicum HOM05D000002 ORTHO05D390293 4.5e-18 94.7 68 77.9
Peaxi162Scf00991g00210 Petunia axillaris HOM05D000622 ORTHO05D000475 3.8e-17 91.7 73 71.2
Dinv34937 Davidia involucrata HOM05D000622 ORTHO05D000475 7.5e-13 77.4 76 60.5
CAN.G497.98 Capsicum annuum HOM05D000622 ORTHO05D000475 6.6e-09 64.3 57 68.4
CSS0044038 Camellia sinensis var. sinensis HOM05D000622 ORTHO05D000475 8.6e-09 63.9 76 50.0
Migut.K01271 Erythranthe guttata HOM05D000622 ORTHO05D000475 1.1e-08 63.5 73 49.3
vmacro05640 Vaccinium macrocarpon HOM05D000622 ORTHO05D000475 1.1e-08 63.5 76 51.3
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 1.9e-08 62.8 73 50.7
Oeu051023.3 Olea europaea HOM05D000622 ORTHO05D000475 2.5e-08 62.4 54 64.8
Sopen02g033610 Solanum pennellii HOM05D000622 ORTHO05D000475 2.5e-08 62.4 61 63.9
PGSC0003DMG400001461 Solanum tuberosum HOM05D000622 ORTHO05D000475 3.3e-08 62.0 61 63.9
Solyc02g030530.1 Solanum lycopersicum HOM05D000622 ORTHO05D000475 5.6e-08 61.2 49 73.5
Solyc02g088920.4 Solanum lycopersicum HOM05D000622 ORTHO05D000475 5.6e-08 61.2 62 64.5
Sopen10g021990 Solanum pennellii HOM05D000622 ORTHO05D000475 5.6e-08 61.2 42 76.2
Lj4A119G48 Lonicera japonica HOM05D000622 ORTHO05D000475 7.3e-08 60.8 78 53.8
DCAR_011038 Daucus carota HOM05D000622 ORTHO05D000475 1.2e-07 60.1 77 51.9
SGA_v2.0_scaffold4G02381 Striga asiatica HOM05D000622 ORTHO05D000475 8.0e-07 57.4 73 49.3
Rhsim10G0050000 Rhododendron simsii HOM05D000622 ORTHO05D000475 1.8e-06 56.2 76 46.1
unitig_0.g1788 Utricularia gibba HOM05D000622 ORTHO05D000475 1.8e-06 56.2 78 43.6
Sopen01g024940 Solanum pennellii HOM05D000002 ORTHO05D026171 6.8e-06 54.3 40 70.0
SalBow1G1760 Salvia bowleyana HOM05D000622 ORTHO05D000475 8.9e-06 53.9 74 50.0


User provided reference genes

Program Settings