Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 8.8e-57 223.4 113 100.0
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 2.2e-47 192.2 100 97.0
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 2.2e-44 182.2 98 92.9
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 2.9e-44 181.8 99 90.9
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 2.3e-41 172.2 100 87.0
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 7.5e-40 167.2 99 84.8
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 6.8e-33 144.1 108 65.7
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 8.6e-28 127.1 97 67.0
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 1.9e-27 125.9 98 65.3
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 2.5e-27 125.6 98 61.2
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 1.2e-26 123.2 95 64.2
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 2.1e-26 122.5 99 63.6
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 2.1e-26 122.5 98 65.3
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 2.8e-26 122.1 118 56.8
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 6.1e-26 120.9 130 53.1
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 8.0e-26 120.6 113 55.8
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 1.0e-25 120.2 108 62.0
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 2.3e-25 119.0 89 67.4
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 8.9e-25 117.1 116 52.6
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.5e-24 116.3 98 61.2
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.5e-24 116.3 98 61.2
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.5e-24 116.3 116 52.6
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 2.0e-24 115.9 106 60.4
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 2.6e-24 115.5 107 58.9
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 4.4e-24 114.8 98 62.2
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 5.7e-24 114.4 116 51.7
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 7.5e-24 114.0 120 54.2
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 9.8e-24 113.6 97 61.9
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 1.3e-23 113.2 115 51.3
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 2.9e-23 112.1 98 61.2
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 2.9e-23 112.1 121 51.2
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 4.9e-23 111.3 107 58.9
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 6.4e-23 110.9 115 53.0
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 6.4e-23 110.9 108 58.3
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 1.1e-22 110.2 113 53.1
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.4e-22 109.8 121 51.2
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.4e-22 109.8 112 50.9
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 1.4e-22 109.8 116 50.0
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 1.4e-22 109.8 95 61.1
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 1.8e-22 109.4 100 57.0
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 3.2e-22 108.6 120 51.7
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 5.4e-22 107.8 118 50.8
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 5.4e-22 107.8 108 58.3
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 9.2e-22 107.1 107 56.1
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 9.2e-22 107.1 107 56.1
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 9.2e-22 107.1 130 48.5
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 2.0e-21 105.9 99 58.6
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 3.5e-21 105.1 97 60.8
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 3.5e-21 105.1 99 59.6
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 5.9e-21 104.4 102 53.9
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 7.8e-21 104.0 107 56.1
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 7.8e-21 104.0 109 54.1
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 7.8e-21 104.0 98 59.2
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 1.3e-20 103.2 108 55.6
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.7e-20 102.8 114 50.0
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 3.0e-20 102.1 112 52.7
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 3.0e-20 102.1 102 58.8
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 3.0e-20 102.1 103 53.4
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 3.9e-20 101.7 107 55.1
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 3.9e-20 101.7 63 76.2
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 5.0e-20 101.3 108 57.4
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 1.1e-19 100.1 98 53.1
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.5e-19 99.8 114 49.1
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 5.6e-19 97.8 109 50.5
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 7.3e-19 97.4 116 49.1
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.1e-18 95.9 74 60.8
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 8.0e-18 94.0 108 46.3
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 1.1e-17 93.6 112 46.4
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 1.1e-17 93.6 112 47.3
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 3.1e-17 92.0 114 46.5
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 5.2e-17 91.3 98 51.0
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 5.2e-17 91.3 76 60.5
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 6.8e-17 90.9 108 48.1
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.2e-16 90.1 55 78.2
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 2.6e-16 89.0 118 42.4
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 3.4e-16 88.6 122 45.1
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 3.4e-16 88.6 122 45.1
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 4.4e-16 88.2 81 54.3
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 4.4e-16 88.2 81 54.3
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 4.4e-16 88.2 81 54.3
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 4.4e-16 88.2 81 54.3
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 1.7e-15 86.3 105 52.4
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 2.2e-15 85.9 101 48.5
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 2.9e-15 85.5 65 56.9
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 4.9e-15 84.7 65 55.4
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 6.4e-15 84.3 66 56.1
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 1.1e-14 83.6 81 49.4
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 1.1e-14 83.6 84 58.3
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 1.9e-14 82.8 81 56.8
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 3.2e-14 82.0 56 62.5
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 3.2e-14 82.0 98 44.9
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 4.1e-14 81.6 96 42.7
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 4.1e-14 81.6 65 53.8
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 5.4e-14 81.3 100 49.0
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 9.2e-14 80.5 72 54.2
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 3.6e-10 68.6 125 40.0
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 4.7e-10 68.2 104 41.3
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 8.3e-07 57.4 52 55.8
C07p40980 Brassica napus HOM05D008896 ORTHO05D011108 2.4e-06 55.8 49 57.1
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 5.4e-06 54.7 107 38.3


User provided reference genes

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