Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g056330.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-66 254.6 123 100.0
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.9e-63 243.4 122 95.9
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-60 235.7 120 94.2
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.1e-43 179.1 122 75.4
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-43 177.9 122 73.0
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-43 177.9 122 73.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-43 177.9 122 73.0
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-43 177.9 122 73.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 4.6e-43 177.9 122 73.0
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 3.9e-42 174.9 122 72.1
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 5.1e-42 174.5 122 70.5
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 8.7e-42 173.7 124 70.2
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 9.6e-41 170.2 123 68.3
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 6.2e-40 167.5 124 71.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 6.9e-39 164.1 120 68.3
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.5e-38 162.9 124 68.5
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.7e-37 159.5 124 66.9
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.9e-37 158.7 122 70.5
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.7e-35 152.1 126 66.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 4.6e-35 151.4 120 67.5
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.7e-34 147.1 123 65.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-33 146.4 121 64.5
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-33 146.4 122 63.9
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 4.8e-32 141.4 113 64.6
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.4e-31 139.8 122 60.7
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 6.9e-31 137.5 125 61.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.2e-28 128.6 127 55.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 3.2e-28 128.6 122 59.8
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 4.2e-28 128.3 124 54.8
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 4.2e-28 128.3 119 61.3
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.1e-27 125.9 62 93.5
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.0e-26 122.1 112 56.2
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 3.0e-26 122.1 116 57.8
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.1e-26 121.3 62 90.3
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.5e-25 119.8 60 91.7
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.2e-24 115.9 112 55.4
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.2e-24 115.9 112 55.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 8.2e-24 114.0 112 54.5
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-22 110.2 102 60.8
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 3.4e-22 108.6 79 65.8
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.5e-22 108.2 108 57.4
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.9e-22 107.8 98 61.2
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.2e-21 105.9 120 54.2
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 2.2e-21 105.9 120 54.2
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 2.2e-21 105.9 120 54.2
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.2e-21 105.9 120 54.2
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 2.2e-21 105.9 120 54.2
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 8.5e-21 104.0 80 62.5
Migut.G01245 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.4e-20 103.2 76 72.4
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.6e-19 99.8 119 53.8
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 1.4e-18 96.7 73 63.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-18 95.1 49 91.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-18 95.1 49 91.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-18 95.1 49 91.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-18 95.1 49 91.8
TPR.G2741 Trifolium pratense HOM05D000216 ORTHO05D000634 2.5e-17 92.4 120 48.3
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.7e-17 91.3 70 71.4
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 9.7e-17 90.5 60 70.0
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.8e-16 89.0 77 62.3
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.1e-15 84.0 79 59.5
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 1.4e-12 76.6 93 52.7
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-12 75.5 49 75.5
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.5e-12 74.7 122 43.4
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 7.4e-09 64.3 112 38.4
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 9.7e-09 63.9 67 52.2
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 2.2e-08 62.8 115 37.4
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 1.4e-07 60.1 57 54.4
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.5e-06 55.1 102 39.2
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.9e-06 54.7 44 65.9


User provided reference genes

Program Settings