Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 3.9e-57 224.6 113 100.0
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 5.5e-51 204.1 108 91.7
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 5.5e-51 204.1 108 91.7
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 5.5e-51 204.1 110 96.4
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 9.4e-51 203.4 110 90.0
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 1.6e-50 202.6 108 93.5
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 1.6e-50 202.6 108 93.5
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 1.6e-50 202.6 108 93.5
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 2.7e-50 201.8 108 91.7
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 6.1e-50 200.7 112 87.5
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 6.1e-50 200.7 108 90.7
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 8.0e-50 200.3 108 88.9
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.4e-49 199.5 108 88.0
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 1.8e-49 199.1 110 92.7
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 3.0e-49 198.4 108 88.9
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.0e-49 198.4 110 92.7
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 5.2e-49 197.6 96 97.9
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 5.2e-49 197.6 113 90.3
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 5.2e-49 197.6 115 89.6
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 5.2e-49 197.6 113 90.3
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 6.7e-49 197.2 110 89.1
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 6.7e-49 197.2 110 87.3
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 6.7e-49 197.2 96 96.9
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 8.8e-49 196.8 110 87.3
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 8.8e-49 196.8 110 87.3
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 1.5e-48 196.1 113 89.4
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.5e-48 196.1 111 85.6
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 2.0e-48 195.7 119 84.0
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 2.0e-48 195.7 96 95.8
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 2.0e-48 195.7 96 95.8
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.0e-48 195.7 108 89.8
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 2.6e-48 195.3 108 88.0
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 2.6e-48 195.3 108 88.0
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 4.4e-48 194.5 112 92.9
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 4.4e-48 194.5 96 94.8
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 5.7e-48 194.1 105 93.3
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 5.7e-48 194.1 110 91.8
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 7.5e-48 193.7 108 86.1
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 7.5e-48 193.7 114 91.2
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 1.3e-47 193.0 108 85.2
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.7e-47 192.6 118 82.2
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 1.7e-47 192.6 112 88.4
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.2e-47 192.2 119 80.7
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 2.2e-47 192.2 96 93.8
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 2.2e-47 192.2 108 87.0
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 3.7e-47 191.4 108 87.0
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 3.7e-47 191.4 97 94.8
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 3.7e-47 191.4 121 82.6
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 6.3e-47 190.7 95 93.7
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 8.2e-47 190.3 96 91.7
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 8.2e-47 190.3 96 91.7
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 8.2e-47 190.3 121 82.6
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 8.2e-47 190.3 116 84.5
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 8.2e-47 190.3 95 93.7
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 8.2e-47 190.3 96 91.7
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 8.2e-47 190.3 108 87.0
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 1.1e-46 189.9 96 92.7
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.1e-46 189.9 96 92.7
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 1.1e-46 189.9 96 92.7
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 1.8e-46 189.1 96 93.8
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 1.8e-46 189.1 98 91.8
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 3.1e-46 188.3 96 91.7
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.1e-46 188.3 108 82.4
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 3.1e-46 188.3 96 91.7
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 9.1e-46 186.8 96 90.6
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 1.2e-45 186.4 107 86.0
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 1.2e-45 186.4 96 90.6
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 1.2e-45 186.4 108 84.3
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.2e-45 186.4 108 84.3
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.6e-45 186.0 108 84.3
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.6e-45 186.0 106 84.0
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 2.0e-45 185.7 96 88.5
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 2.0e-45 185.7 96 88.5
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 2.0e-45 185.7 109 86.2
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.0e-45 185.7 120 81.7
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 2.7e-45 185.3 108 87.0
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 3.5e-45 184.9 95 90.5
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 4.5e-45 184.5 108 81.5
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 4.5e-45 184.5 108 81.5
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 5.9e-45 184.1 125 79.2
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.0e-44 183.3 139 73.4
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.3e-44 183.0 144 71.5
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 2.2e-44 182.2 96 87.5
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 2.9e-44 181.8 116 76.7
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 6.5e-44 180.6 128 71.9
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 8.5e-44 180.3 109 84.4
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 1.1e-43 179.9 89 94.4
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 1.9e-43 179.1 116 81.0
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 2.5e-43 178.7 117 79.5
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 2.5e-43 178.7 117 79.5
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 3.2e-43 178.3 114 80.7
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 3.2e-43 178.3 114 80.7
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 4.2e-43 177.9 96 86.5
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 4.2e-43 177.9 113 81.4
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 5.5e-43 177.6 96 86.5
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 9.4e-43 176.8 113 80.5
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 9.4e-43 176.8 113 80.5
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 2.1e-42 175.6 94 87.2
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 2.7e-42 175.3 133 68.4
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 4.7e-42 174.5 134 74.6
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 8.0e-42 173.7 113 82.3
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 1.4e-41 172.9 113 82.3
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 3.0e-41 171.8 109 80.7
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 3.0e-41 171.8 136 72.8
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 5.2e-41 171.0 151 63.6
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 6.8e-41 170.6 112 82.1
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 8.8e-41 170.2 95 81.1
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 1.2e-40 169.9 120 77.5
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 1.2e-40 169.9 113 81.4
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 2.0e-40 169.1 96 83.3
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 2.6e-40 168.7 102 75.5
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 3.4e-40 168.3 95 80.0
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 4.4e-40 167.9 89 87.6
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 4.4e-40 167.9 108 73.1
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 4.4e-40 167.9 98 84.7
CAN.G678.10 Capsicum annuum HOM05D004147 ORTHO05D005606 5.7e-40 167.5 108 78.7
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 7.5e-40 167.2 106 84.0
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 9.8e-40 166.8 112 75.0
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 2.2e-39 165.6 96 78.1
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 8.3e-39 163.7 95 91.6
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.1e-38 163.3 87 86.2
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.1e-38 163.3 108 75.0
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 1.1e-38 163.3 94 92.6
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 2.4e-38 162.2 95 81.1
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 5.4e-38 161.0 95 78.9
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 5.4e-38 161.0 96 80.2
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 2.0e-37 159.1 85 87.1
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 2.7e-37 158.7 156 60.3
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 2.9e-36 155.2 95 80.0
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 3.2e-35 151.8 94 80.9
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 3.0e-33 145.2 104 76.0
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 5.7e-32 141.0 108 69.4
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 3.8e-28 128.3 61 98.4
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 1.9e-27 125.9 76 85.5
Cre06.g278208 Chlamydomonas reinhardtii HOM05D004147 ORTHO05D005606 1.6e-18 96.3 95 45.3
TAR623G1050 Trochodendron aralioides HOM05D004147 ORTHO05D005606 3.6e-18 95.1 57 86.0
Lsat_1_v5_gn_4_94280 Lactuca sativa HOM05D004147 ORTHO05D005606 1.5e-16 89.7 61 70.5
HanXRQChr10g0307541 Helianthus annuus HOM05D004147 ORTHO05D005606 2.2e-15 85.9 46 82.6
Lsat_1_v5_gn_8_97821 Lactuca sativa HOM05D004147 ORTHO05D005606 3.2e-14 82.0 53 73.6
PRCOL_00001079 Prasinoderma coloniale HOM05D004147 ORTHO05D005606 2.3e-12 75.9 106 35.8
Potri.013G061100 Populus trichocarpa HOM05D004147 ORTHO05D005606 1.1e-09 67.0 100 38.0
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 2.6e-08 62.4 96 37.5
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 2.6e-08 62.4 96 37.5
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 4.4e-08 61.6 90 40.0
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 5.8e-08 61.2 90 38.9
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 1.3e-07 60.1 90 38.9
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 1.7e-07 59.7 90 38.9
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.2e-07 59.3 28 96.4
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 2.9e-07 58.9 90 38.9
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.4e-06 55.8 55 43.6
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 4.1e-06 55.1 54 42.6


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