Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.8e-27 124.0 59 100.0
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 4.2e-18 94.0 57 78.9
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 7.2e-18 93.2 53 83.0
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 9.4e-18 92.8 53 84.9
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 1.2e-17 92.4 53 83.0
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 1.2e-17 92.4 53 83.0
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 1.2e-17 92.4 53 83.0
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 1.2e-17 92.4 53 83.0
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 1.6e-17 92.0 53 81.1
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 2.7e-17 91.3 52 84.6
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 81.1
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 3.6e-17 90.9 53 83.0
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 4.6e-17 90.5 53 81.1
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 6.1e-17 90.1 52 82.7
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 7.9e-17 89.7 53 81.1
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 7.9e-17 89.7 53 81.1
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 7.9e-17 89.7 53 81.1
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 7.9e-17 89.7 53 81.1
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 1.0e-16 89.4 52 82.7
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 1.0e-16 89.4 53 79.2
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 1.4e-16 89.0 53 79.2
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 1.4e-16 89.0 53 77.4
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 1.4e-16 89.0 53 77.4
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 1.4e-16 89.0 52 80.8
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 1.8e-16 88.6 53 81.1
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 1.8e-16 88.6 53 79.2
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.3e-16 88.2 53 81.1
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 2.3e-16 88.2 53 81.1
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 2.3e-16 88.2 53 81.1
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 3.0e-16 87.8 52 78.8
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 79.2
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.0e-16 87.8 53 79.2
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.0e-16 87.8 53 79.2
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.0e-16 87.8 53 79.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 79.2
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.0e-16 87.8 53 79.2
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 79.2
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 79.2
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 77.4
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 3.0e-16 87.8 53 79.2
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 3.9e-16 87.4 53 79.2
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 3.9e-16 87.4 53 79.2
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 3.9e-16 87.4 53 79.2
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 3.9e-16 87.4 53 77.4
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 5.1e-16 87.0 53 79.2
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 5.1e-16 87.0 52 76.9
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 5.1e-16 87.0 53 75.5
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 8.8e-16 86.3 53 79.2
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.5e-15 85.5 58 74.1
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.5e-15 85.5 50 78.0
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 1.9e-15 85.1 51 78.4
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 1.9e-15 85.1 53 77.4
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 2.5e-15 84.7 53 73.6
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 2.5e-15 84.7 53 77.4
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 2.5e-15 84.7 53 73.6
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 4.3e-15 84.0 52 75.0
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 4.3e-15 84.0 52 75.0
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 7.4e-15 83.2 53 73.6
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 9.7e-15 82.8 53 77.4
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 9.7e-15 82.8 49 79.6
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 4.8e-14 80.5 53 71.7
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 1.1e-13 79.3 53 71.7
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 1.1e-13 79.3 53 69.8
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.4e-13 78.2 53 67.9
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 4.1e-13 77.4 53 67.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 4.1e-13 77.4 53 67.9
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 9.1e-13 76.3 53 66.0
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 9.1e-13 76.3 50 72.0
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 4.5e-12 73.9 53 66.0
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 7.7e-12 73.2 51 66.7
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 2.5e-10 68.2 53 60.4
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 3.6e-09 64.3 53 56.6
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.0e-08 62.8 43 62.8
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 4.8e-06 53.9 28 85.7


User provided reference genes

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