Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 6.7e-63 243.8 121 100.0
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 4.7e-32 141.4 167 50.3
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 4.7e-32 141.4 167 50.3
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 9.8e-30 133.7 169 47.3
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 9.2e-28 127.1 167 46.1
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 9.2e-28 127.1 167 46.1
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 2.3e-26 122.5 167 44.9
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 2.3e-26 122.5 170 44.7
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 3.9e-26 121.7 169 41.4
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 1.9e-25 119.4 169 43.2
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 7.3e-25 117.5 168 41.7
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 1.2e-24 116.7 167 42.5
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 2.1e-24 115.9 167 43.1
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 2.8e-24 115.5 167 41.9
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.6e-24 115.2 167 42.5
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.6e-24 115.2 167 42.5
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 6.2e-24 114.4 167 40.1
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 8.0e-24 114.0 167 40.1
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 1.0e-23 113.6 169 42.0
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 1.4e-23 113.2 167 42.5
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 2.3e-23 112.5 167 41.9
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.3e-23 112.5 167 41.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-23 112.1 167 41.9
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.1e-23 112.1 167 41.9
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.1e-23 112.1 167 41.9
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.1e-23 112.1 167 41.9
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 3.1e-23 112.1 167 41.9
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 5.2e-23 111.3 167 41.3
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 5.2e-23 111.3 167 41.3
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 5.2e-23 111.3 167 40.1
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 6.8e-23 110.9 167 41.3
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 6.8e-23 110.9 167 40.1
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 8.9e-23 110.5 167 41.3
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 1.2e-22 110.2 167 41.3
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 1.2e-22 110.2 167 40.7
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 1.2e-22 110.2 167 41.3
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 1.2e-22 110.2 167 40.7
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.5e-22 109.8 167 40.1
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.5e-22 109.8 167 40.7
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 2.0e-22 109.4 167 41.3
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 2.6e-22 109.0 167 40.7
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 2.6e-22 109.0 167 40.7
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 3.4e-22 108.6 167 40.1
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 4.4e-22 108.2 167 40.1
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 4.4e-22 108.2 167 40.1
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 4.4e-22 108.2 167 40.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 5.8e-22 107.8 167 41.9
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 5.8e-22 107.8 167 40.1
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 5.8e-22 107.8 167 40.7
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 5.8e-22 107.8 167 40.1
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 7.5e-22 107.5 169 39.1
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 1.3e-21 106.7 167 40.7
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 1.7e-21 106.3 167 40.1
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 2.2e-21 105.9 167 40.1
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 2.2e-21 105.9 168 41.7
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 2.2e-21 105.9 141 46.1
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 2.9e-21 105.5 167 39.5
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 3.7e-21 105.1 167 40.1
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 6.4e-21 104.4 167 40.1
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 8.3e-21 104.0 168 38.7
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 1.1e-20 103.6 167 40.1
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 1.1e-20 103.6 170 40.6
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 3.2e-20 102.1 168 39.3
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 3.2e-20 102.1 168 39.3
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 3.2e-20 102.1 167 38.9
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 4.1e-20 101.7 168 39.3
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 1.2e-19 100.1 170 37.6
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 1.6e-19 99.8 168 39.3
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.6e-19 99.8 157 41.4
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 2.0e-19 99.4 168 39.3
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 3.5e-19 98.6 167 39.5
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.5e-19 98.6 60 76.7
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 4.6e-19 98.2 180 37.2
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 1.3e-18 96.7 167 37.7
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 1.7e-18 96.3 168 38.1
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 2.3e-18 95.9 168 37.5
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 8.6e-18 94.0 142 43.0
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 8.6e-18 94.0 193 36.3
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 1.1e-17 93.6 168 38.7
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 1.5e-17 93.2 166 36.7
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.5e-17 93.2 168 36.9
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 4.3e-17 91.7 168 35.7
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 4.3e-17 91.7 168 37.5
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 4.3e-17 91.7 167 38.9
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 5.6e-17 91.3 168 38.1
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 5.6e-17 91.3 167 38.3
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 2.1e-16 89.4 169 37.9
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 4.7e-16 88.2 167 37.7
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 1.4e-15 86.7 79 50.6
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 3.1e-15 85.5 167 34.1
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 1.3e-13 80.1 79 49.4
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.7e-13 79.7 77 51.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 2.2e-13 79.3 167 30.5
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.9e-13 79.0 167 29.3
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 3.7e-13 78.6 79 49.4
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.9e-12 76.3 167 29.9
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 9.2e-12 73.9 97 47.4
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 1.3e-10 70.1 118 37.3
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 7.3e-09 64.3 80 42.5
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 8.9e-07 57.4 38 76.3
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 3.4e-06 55.5 38 73.7


User provided reference genes

Program Settings