Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.0e-41 172.9 83 100.0
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 3.6e-23 111.3 72 73.6
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 5.2e-22 107.5 72 73.6
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 5.2e-22 107.5 72 73.6
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 4.4e-21 104.4 72 70.8
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 7.5e-21 103.6 72 70.8
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 1.3e-20 102.8 72 69.4
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 7.0e-19 97.1 72 66.7
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.6e-18 95.9 70 67.1
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 1.6e-18 95.9 70 67.1
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 1.6e-18 95.9 70 67.1
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 1.6e-18 95.9 79 62.0
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.6e-18 95.9 79 62.0
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.6e-18 95.9 79 62.0
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.6e-18 95.9 79 62.0
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.6e-18 95.9 79 62.0
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 1.6e-18 95.9 79 62.0
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 2.0e-18 95.5 80 58.8
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 2.0e-18 95.5 74 64.9
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 2.0e-18 95.5 70 65.7
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 2.0e-18 95.5 73 64.4
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 2.7e-18 95.1 65 70.8
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 2.7e-18 95.1 74 63.5
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 2.7e-18 95.1 65 72.3
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 2.7e-18 95.1 70 65.7
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 3.5e-18 94.7 70 64.3
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.5e-18 94.7 72 61.1
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 3.5e-18 94.7 74 62.2
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 63.5
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 62.2
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 62.2
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 62.2
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 62.2
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 4.5e-18 94.4 74 62.2
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 4.5e-18 94.4 70 67.1
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 4.5e-18 94.4 72 66.7
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 5.9e-18 94.0 74 62.2
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.9e-18 94.0 79 60.8
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 5.9e-18 94.0 73 64.4
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 5.9e-18 94.0 62 72.6
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 5.9e-18 94.0 65 70.8
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 7.7e-18 93.6 70 67.1
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 7.7e-18 93.6 73 61.6
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 7.7e-18 93.6 78 60.3
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.0e-17 93.2 74 60.8
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 1.0e-17 93.2 74 60.8
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 1.0e-17 93.2 65 70.8
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 1.0e-17 93.2 70 64.3
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.3e-17 92.8 65 69.2
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 2.2e-17 92.0 73 63.0
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 2.2e-17 92.0 70 61.4
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 2.2e-17 92.0 73 63.0
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 3.8e-17 91.3 72 62.5
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 3.8e-17 91.3 73 63.0
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 5.0e-17 90.9 62 67.7
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 5.0e-17 90.9 73 61.6
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 5.0e-17 90.9 73 61.6
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 6.5e-17 90.5 70 62.9
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 6.5e-17 90.5 73 61.6
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 8.5e-17 90.1 70 62.9
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 1.1e-16 89.7 73 61.6
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 1.1e-16 89.7 65 66.2
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 1.1e-16 89.7 73 61.6
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 1.1e-16 89.7 62 67.7
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.5e-16 89.4 62 67.7
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 1.5e-16 89.4 64 67.2
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 1.9e-16 89.0 73 60.3
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 1.9e-16 89.0 62 69.4
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 1.9e-16 89.0 80 56.2
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.5e-16 88.6 70 62.9
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 2.5e-16 88.6 72 59.7
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 4.2e-16 87.8 67 62.7
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 7.2e-16 87.0 62 67.7
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 9.4e-16 86.7 65 66.2
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 9.4e-16 86.7 73 60.3
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 1.2e-15 86.3 62 67.7
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 2.1e-15 85.5 73 57.5
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 2.7e-15 85.1 70 60.0
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.8e-14 82.4 65 63.1
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 5.2e-14 80.9 64 54.7
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 6.8e-14 80.5 72 55.6
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 8.8e-14 80.1 74 55.4
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 8.8e-14 80.1 88 51.1
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.2e-13 79.7 86 52.3
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 1.2e-13 79.7 62 66.1
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.5e-13 79.3 62 53.2
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 2.0e-13 79.0 62 53.2
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 4.4e-13 77.8 72 56.9
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 3.7e-12 74.7 73 52.1
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 2.7e-10 68.6 62 56.5
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.1e-08 63.2 67 44.8
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 5.5e-08 60.8 43 62.8
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 9.4e-08 60.1 61 49.2
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 3.6e-07 58.2 59 47.5
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 4.7e-07 57.8 71 39.4
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.8e-06 55.8 68 44.1
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 4.0e-06 54.7 42 61.9


User provided reference genes

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