Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 2.2e-171 605.5 298 100.0
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.2e-155 552.4 298 91.6
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 4.9e-155 551.2 298 90.9
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 3.1e-154 548.5 329 85.1
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 2.3e-144 515.8 298 84.2
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 3.3e-143 511.9 298 83.2
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 6.8e-141 504.2 298 82.2
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.4e-140 501.5 291 81.8
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.7e-139 499.6 309 79.9
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.4e-138 496.5 298 80.9
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.9e-138 496.1 298 82.2
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 4.1e-138 495.0 299 80.9
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 5.4e-138 494.6 292 81.8
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 7.0e-138 494.2 298 79.5
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 3.5e-137 491.9 299 80.6
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 4.6e-137 491.5 299 80.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.0e-136 490.3 296 80.4
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 1.7e-136 489.6 292 80.5
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 3.0e-136 488.8 292 80.1
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 3.0e-136 488.8 298 80.2
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 5.0e-136 488.0 298 80.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 8.6e-136 487.3 298 79.5
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 1.9e-135 486.1 299 79.9
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.9e-135 486.1 298 79.5
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 4.3e-135 485.0 298 76.8
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 2.8e-134 482.3 299 78.6
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 4.7e-134 481.5 290 79.0
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 4.7e-134 481.5 292 79.5
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 5.2e-133 478.0 293 78.8
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 5.2e-133 478.0 298 77.5
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.5e-132 476.5 298 77.2
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.5e-132 476.5 299 78.3
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 4.4e-132 474.9 298 77.2
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 7.5e-132 474.2 298 77.2
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 9.8e-132 473.8 292 77.4
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 1.3e-131 473.4 297 76.1
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.7e-131 473.0 302 77.2
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 2.2e-131 472.6 298 77.5
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 6.4e-131 471.1 299 77.3
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 6.4e-131 471.1 298 76.8
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 8.3e-131 470.7 295 77.6
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.4e-130 469.9 298 77.2
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.9e-130 469.5 331 71.0
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 3.2e-130 468.8 293 77.8
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 3.2e-130 468.8 292 78.1
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.1e-130 468.4 298 76.8
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 7.1e-130 467.6 298 76.2
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 7.1e-130 467.6 298 76.8
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 7.1e-130 467.6 298 77.2
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 9.2e-130 467.2 292 77.1
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 9.2e-130 467.2 294 77.6
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 2.1e-129 466.1 298 75.5
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.7e-129 465.7 293 76.8
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.7e-129 465.7 298 76.5
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 3.5e-129 465.3 298 75.8
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 4.6e-129 464.9 299 76.3
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 7.8e-129 464.2 298 75.8
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 3.9e-128 461.8 282 78.7
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 5.1e-128 461.5 292 76.4
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 6.6e-128 461.1 293 76.5
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 1.5e-127 459.9 298 75.5
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.5e-127 459.9 298 75.8
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 2.5e-127 459.1 292 77.4
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 7.3e-127 457.6 291 75.6
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 1.2e-126 456.8 292 76.4
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.1e-126 456.1 297 74.4
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 6.2e-126 454.5 295 75.9
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 8.9e-125 450.7 275 78.9
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 7.6e-124 447.6 333 68.5
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 7.6e-124 447.6 291 72.9
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.3e-123 446.8 291 74.2
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 2.2e-123 446.0 291 73.5
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 3.7e-123 445.3 291 73.5
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 4.9e-123 444.9 306 72.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 6.4e-123 444.5 291 73.2
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 6.4e-123 444.5 291 73.2
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 6.4e-123 444.5 291 73.2
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 6.4e-123 444.5 291 73.2
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 7.1e-122 441.0 291 72.5
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 1.6e-121 439.9 291 72.2
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 1.7e-120 436.4 291 72.5
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.7e-120 436.4 291 70.8
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 3.3e-119 432.2 298 72.5
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.1e-118 429.5 247 83.4
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 1.1e-117 427.2 274 77.0
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.2e-116 423.7 268 80.6
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 4.4e-116 421.8 239 84.9
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.9e-114 416.4 238 84.5
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 4.2e-114 415.2 270 77.0
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 7.1e-114 414.5 294 69.4
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.3e-112 409.5 233 82.8
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.9e-111 406.4 289 67.5
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 1.1e-109 400.6 267 72.7
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.4e-109 399.4 291 67.4
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 2.0e-108 396.4 263 75.3
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 5.1e-104 381.7 221 82.4
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 4.3e-95 352.1 237 72.6
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 3.8e-91 339.0 287 58.2
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 1.2e-89 334.0 290 56.9
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 6.0e-89 331.6 288 57.3
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 3.8e-83 312.4 282 61.3
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 6.1e-81 305.1 410 44.9
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 5.1e-80 302.0 208 69.7
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 2.1e-65 253.4 272 51.5
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 7.7e-60 235.0 258 54.3
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.6e-57 227.3 146 78.1
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 8.8e-56 221.5 239 46.0
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 3.1e-53 213.0 291 38.8
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.9e-50 203.8 125 79.2
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 1.2e-49 201.1 117 75.2
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.7e-46 190.7 195 51.3
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 3.5e-44 183.0 218 50.5
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 5.2e-40 169.1 175 55.4
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 9.5e-34 148.3 233 41.2
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 8.9e-32 141.7 114 62.3
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 1.7e-27 127.5 81 81.5
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 1.8e-24 117.5 73 74.0
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 4.3e-18 96.3 60 78.3
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 8.1e-17 92.0 52 80.8
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 2.6e-15 87.0 50 70.0
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-14 84.7 146 37.0
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 2.2e-14 84.0 48 77.1
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 4.1e-13 79.7 52 67.3
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 5.4e-13 79.3 190 33.2
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 1.6e-12 77.8 59 62.7
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 1.2e-09 68.2 46 65.2
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.6e-09 67.8 59 61.0
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 1.1e-08 65.1 169 32.0
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 1.4e-08 64.7 190 27.9
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 4.0e-08 63.2 189 30.7
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 2.0e-07 60.8 167 29.9
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 7.6e-07 58.9 26 88.5
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 7.6e-07 58.9 170 27.6
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.2e-06 57.4 82 45.1
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.9e-06 57.0 64 54.7
Potri.010G239500 Populus trichocarpa HOM05D005598 ORTHO05D006587 2.9e-06 57.0 62 51.6
BraA09t40992Z Brassica rapa HOM05D005598 ORTHO05D040595 6.4e-06 55.8 115 38.3
A09p55890 Brassica napus HOM05D005598 ORTHO05D040595 8.4e-06 55.5 52 51.9


User provided reference genes

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