Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 5.4e-40 167.2 82 100.0
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 8.7e-30 133.3 64 100.0
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 1.9e-29 132.1 65 96.9
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.5e-29 131.7 63 100.0
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 4.8e-28 127.5 65 90.8
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.4e-27 125.9 65 89.2
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 4.0e-27 124.4 65 87.7
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 4.0e-27 124.4 65 90.8
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 7.6e-26 120.2 65 81.5
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 9.9e-26 119.8 65 81.5
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 9.9e-26 119.8 65 83.1
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.2e-25 118.6 65 83.1
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.9e-25 118.2 65 83.1
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 6.4e-25 117.1 65 83.1
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.1e-24 116.3 65 80.0
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.4e-24 115.9 65 78.5
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 5.4e-24 114.0 65 80.0
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 5.4e-24 114.0 65 80.0
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 5.4e-24 114.0 65 78.5
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 5.4e-24 114.0 65 80.0
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 5.4e-24 114.0 65 78.5
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 7.1e-24 113.6 65 78.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 7.1e-24 113.6 65 80.0
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 9.3e-24 113.2 65 80.0
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 1.6e-23 112.5 65 76.9
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 1.6e-23 112.5 65 76.9
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.1e-23 112.1 65 76.9
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.1e-23 112.1 65 76.9
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 2.1e-23 112.1 65 76.9
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 2.7e-23 111.7 65 76.9
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.7e-23 111.7 65 78.5
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.7e-23 111.7 65 80.0
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 3.5e-23 111.3 65 76.9
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 3.5e-23 111.3 65 75.4
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.5e-23 111.3 65 75.4
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 3.5e-23 111.3 65 78.5
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 4.6e-23 110.9 65 76.9
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 4.6e-23 110.9 65 76.9
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 4.6e-23 110.9 65 76.9
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 4.6e-23 110.9 63 81.0
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 4.6e-23 110.9 65 76.9
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 7.9e-23 110.2 65 78.5
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 1.8e-22 109.0 65 73.8
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 1.8e-22 109.0 65 73.8
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 1.8e-22 109.0 65 75.4
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 1.8e-22 109.0 66 77.3
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.3e-22 108.6 65 73.8
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 6.7e-22 107.1 65 73.8
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 6.7e-22 107.1 65 78.5
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 8.7e-22 106.7 66 74.2
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.7e-22 106.7 65 73.8
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.7e-22 106.7 65 73.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.1e-21 106.3 67 71.6
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.5e-21 105.9 65 70.8
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.5e-21 105.9 65 73.8
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.5e-21 105.9 65 73.8
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 1.5e-21 105.9 65 76.9
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.5e-21 105.9 65 72.3
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 1.9e-21 105.5 65 75.4
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.9e-21 105.5 65 69.2
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 2.5e-21 105.1 65 75.4
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 3.3e-21 104.8 65 76.9
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 3.3e-21 104.8 65 72.3
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 3.3e-21 104.8 65 70.8
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.3e-21 104.4 67 73.1
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 7.4e-21 103.6 65 76.9
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 9.6e-21 103.2 65 76.9
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.6e-21 103.2 67 70.1
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.3e-20 102.8 66 69.7
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.3e-20 102.8 63 73.0
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.1e-20 102.1 73 68.5
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 2.8e-20 101.7 67 74.6
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 2.8e-20 101.7 66 72.7
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 3.7e-20 101.3 66 71.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 3.1e-19 98.2 65 67.7
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 4.0e-19 97.8 78 65.4
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 5.3e-19 97.4 64 70.3
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 9.0e-19 96.7 60 70.0
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 1.2e-18 96.3 67 62.7
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 1.5e-18 95.9 78 64.1
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 3.4e-18 94.7 81 60.5
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 5.8e-18 94.0 64 67.2
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.2e-17 92.0 59 71.2
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 2.9e-17 91.7 59 67.8
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 3.8e-17 91.3 59 71.2
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 3.8e-17 91.3 59 71.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 3.8e-17 91.3 56 75.0
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 6.5e-17 90.5 60 65.0
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 6.5e-17 90.5 58 74.1
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 8.4e-17 90.1 59 69.5
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 8.4e-17 90.1 59 69.5
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.1e-16 89.7 60 65.0
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.4e-16 89.4 65 67.7
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 2.5e-16 88.6 60 68.3
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 2.7e-15 85.1 62 62.9
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 2.7e-15 85.1 60 66.7
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 4.6e-15 84.3 65 61.5
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.0e-14 81.6 67 58.2
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.1e-13 79.7 61 57.4
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 1.3e-12 76.3 65 61.5
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.6e-12 75.9 65 55.4
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.8e-11 72.4 38 76.3
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 2.0e-10 68.9 61 54.1
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 7.6e-10 67.0 36 69.4
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 7.6e-10 67.0 36 75.0
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 7.6e-10 67.0 36 75.0
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.0e-09 66.6 35 77.1
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 3.2e-08 61.6 38 65.8
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 5.5e-08 60.8 65 47.7
Phvul.008G238000 Phaseolus vulgaris HOM05D026408 ORTHO05D029776 7.9e-07 57.0 65 46.2
VMungo0647G0061 Vigna mungo HOM05D026408 ORTHO05D029776 1.0e-06 56.6 65 46.2


User provided reference genes

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