Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.8e-139 499.2 246 100.0
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 9.3e-128 460.3 246 89.4
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 7.9e-127 457.2 246 89.4
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 1.0e-118 430.3 229 90.4
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 4.1e-115 418.3 242 83.1
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 5.3e-115 417.9 242 83.1
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 5.3e-115 417.9 246 80.9
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 9.0e-115 417.2 246 81.7
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 9.0e-115 417.2 246 81.7
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.0e-114 416.0 246 81.7
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 2.6e-114 415.6 246 81.7
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 2.9e-113 412.1 246 79.3
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 1.1e-112 410.2 246 80.9
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.1e-112 410.2 246 79.7
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.4e-112 409.8 246 82.5
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.6e-111 406.4 247 78.5
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.7e-111 405.6 242 80.2
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 3.5e-111 405.2 242 81.0
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 6.1e-111 404.4 246 78.0
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 2.3e-110 402.5 242 79.8
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 2.3e-110 402.5 246 78.9
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 8.7e-110 400.6 236 80.1
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-109 400.2 242 76.9
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 1.9e-109 399.4 246 78.9
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 5.7e-109 397.9 246 78.5
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 9.7e-109 397.1 246 77.6
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 1.3e-108 396.7 242 77.3
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 2.8e-108 395.6 242 74.4
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 3.7e-108 395.2 246 78.5
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 4.8e-108 394.8 246 77.2
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 4.8e-108 394.8 259 74.5
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 8.2e-108 394.0 242 77.3
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.4e-107 393.3 246 78.5
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.8e-107 392.9 242 76.4
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 1.8e-107 392.9 242 74.8
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.1e-107 392.1 246 78.5
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 4.1e-107 391.7 246 76.8
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 5.3e-107 391.3 242 76.4
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.5e-106 389.8 243 77.4
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 2.6e-106 389.0 246 74.8
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.6e-106 389.0 243 77.4
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 3.4e-106 388.7 247 76.5
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 4.5e-106 388.3 246 76.0
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 5.9e-106 387.9 230 80.9
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 7.7e-106 387.5 243 77.4
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 1.0e-105 387.1 242 76.0
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 1.3e-105 386.7 246 76.8
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 1.3e-105 386.7 246 76.4
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.7e-105 386.3 246 78.0
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 2.2e-105 386.0 246 76.8
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 2.9e-105 385.6 246 75.6
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 2.9e-105 385.6 231 79.7
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 6.5e-105 384.4 246 76.8
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.1e-104 383.6 246 74.0
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.9e-104 382.9 246 74.4
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 1.9e-104 382.9 247 74.9
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 4.2e-104 381.7 242 74.4
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 4.2e-104 381.7 273 69.2
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 7.2e-104 380.9 283 67.8
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 9.4e-104 380.6 246 72.4
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 9.4e-104 380.6 229 79.0
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.6e-103 379.8 246 74.8
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 2.1e-103 379.4 246 73.6
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 2.7e-103 379.0 246 74.0
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 7.9e-103 377.5 246 73.6
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.0e-102 377.1 246 72.4
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.0e-102 377.1 243 73.7
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 3.0e-102 375.6 246 72.4
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 3.9e-102 375.2 246 72.8
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 8.8e-102 374.0 242 71.9
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.1e-101 373.6 242 74.8
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 2.0e-101 372.9 246 71.5
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 4.3e-101 371.7 278 67.3
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.7e-101 371.3 240 73.8
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 5.7e-101 371.3 294 63.6
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.7e-100 369.8 242 71.5
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 2.8e-100 369.0 242 70.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 4.8e-100 368.2 247 71.7
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 4.8e-100 368.2 246 71.5
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 4.8e-100 368.2 242 71.5
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 8.2e-100 367.5 239 73.2
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 5.3e-99 364.8 243 70.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 5.3e-99 364.8 247 70.9
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 6.9e-99 364.4 243 70.4
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 1.2e-98 363.6 254 70.5
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 3.4e-98 362.1 236 69.9
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 2.2e-97 359.4 212 78.8
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 5.5e-96 354.8 246 71.5
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.2e-95 353.6 241 70.5
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 1.2e-95 353.6 330 57.6
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 2.6e-93 345.9 212 78.3
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.7e-89 333.2 236 68.6
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 2.7e-87 325.9 205 76.1
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.2e-86 321.6 205 76.1
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 8.8e-86 320.9 209 75.1
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 5.7e-85 318.2 256 59.4
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 2.8e-84 315.8 283 54.1
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.9e-82 308.1 301 56.1
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.5e-80 302.8 242 64.0
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 9.4e-80 300.8 214 71.0
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 9.4e-80 300.8 255 57.6
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.2e-77 293.9 242 60.3
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 1.3e-68 263.8 321 45.2
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 2.5e-64 249.6 252 51.2
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 5.6e-64 248.4 264 49.2
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 1.1e-56 224.2 255 46.3
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 4.7e-55 218.8 248 47.6
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.0e-54 217.6 342 42.7
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 3.7e-52 209.1 251 45.4
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.1e-51 207.6 148 73.0
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.9e-48 196.8 108 78.7
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.1e-47 193.4 123 78.9
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 1.2e-39 167.5 127 64.6
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.2e-37 161.0 83 84.3
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 3.0e-33 146.4 97 74.2
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.7e-25 120.6 83 68.7
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.7e-25 120.6 83 68.7
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.1e-22 109.8 75 69.3
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 4.0e-22 109.4 59 81.4
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 5.1e-17 92.4 64 70.3
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 3.3e-16 89.7 105 48.6
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 2.0e-13 80.5 51 68.6
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 9.9e-13 78.2 51 66.7
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 9.9e-13 78.2 51 66.7
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 2.2e-12 77.0 122 40.2
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 3.5e-10 69.7 101 36.6
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 1.8e-09 67.4 43 65.1
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 3.9e-09 66.2 37 78.4
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 4.3e-08 62.8 87 40.2
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 5.6e-08 62.4 70 40.0
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 8.1e-07 58.5 38 63.2
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.8e-06 57.4 77 37.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.1e-06 56.6 88 38.6
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 5.3e-06 55.8 73 41.1


User provided reference genes

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