Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015505 Sechium edule HOM05D002263 ORTHO05D012916 5.4e-76 287.7 161 100.0
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 8.5e-29 131.0 204 50.0
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 8.2e-24 114.4 203 46.8
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 1.4e-18 97.1 108 62.0
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 2.6e-17 92.8 211 41.2
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 9.7e-17 90.9 202 39.1
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 1.3e-16 90.5 135 51.9
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 4.8e-16 88.6 215 42.3
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 9.1e-15 84.3 215 41.9
Cpa.g.sc125.26 Carica papaya HOM05D002263 ORTHO05D003537 7.7e-14 81.3 133 48.1
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 7.7e-14 81.3 194 39.2
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 3.8e-13 79.0 96 53.1
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 5.0e-13 78.6 118 48.3
Sabra09G0043300 Salix brachista HOM05D002263 ORTHO05D003537 1.4e-12 77.0 161 43.5
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 3.2e-12 75.9 94 51.1
Hma1.2p1_2160F.1_g315590 Hydrangea macrophylla HOM05D002263 ORTHO05D012916 7.2e-12 74.7 143 44.1
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 7.2e-12 74.7 138 42.0
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 9.4e-12 74.3 191 39.3
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 1.2e-11 73.9 83 57.8
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 1.6e-11 73.6 137 44.5
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 2.7e-11 72.8 203 38.9
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.7e-11 72.8 187 35.8
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 3.6e-11 72.4 203 38.4
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 8.0e-11 71.2 96 53.1
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 1.0e-10 70.9 197 38.6
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 1.4e-10 70.5 111 46.8
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 1.8e-10 70.1 138 40.6
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 2.3e-10 69.7 202 34.7
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 2.3e-10 69.7 148 40.5
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 3.0e-10 69.3 210 38.6
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 5.2e-10 68.6 96 52.1
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 6.7e-10 68.2 136 41.2
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 6.7e-10 68.2 135 42.2
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 1.5e-09 67.0 190 38.9
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 3.3e-09 65.9 103 46.6
COL.COLO4_15049 Corchorus olitorius HOM05D002263 ORTHO05D003537 3.3e-09 65.9 214 35.5
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 3.3e-09 65.9 136 43.4
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 4.4e-09 65.5 199 32.7
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 4.4e-09 65.5 215 36.3
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 5.7e-09 65.1 207 35.7
Nn7g36257 Nelumbo nucifera HOM05D002263 ORTHO05D003537 5.7e-09 65.1 165 37.6
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 5.7e-09 65.1 128 44.5
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 7.4e-09 64.7 204 33.8
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 7.4e-09 64.7 144 43.1
CARHR061110 Cardamine hirsuta HOM05D002263 ORTHO05D012916 1.7e-08 63.5 102 41.2
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 1.7e-08 63.5 84 50.0
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 2.8e-08 62.8 126 40.5
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 2.8e-08 62.8 86 48.8
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 3.7e-08 62.4 123 39.8
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 3.7e-08 62.4 146 39.7
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 4.8e-08 62.0 128 39.1
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 4.8e-08 62.0 143 42.0
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 6.3e-08 61.6 100 46.0
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 8.2e-08 61.2 136 40.4
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 1.1e-07 60.8 119 41.2
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 1.4e-07 60.5 157 35.7
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 1.8e-07 60.1 97 44.3
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 1.8e-07 60.1 97 43.3
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.1e-07 59.3 159 36.5
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 4.1e-07 58.9 107 41.1
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 7.0e-07 58.2 165 39.4
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 7.0e-07 58.2 110 44.5
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 7.0e-07 58.2 99 40.4
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 9.1e-07 57.8 116 40.5
QL08p003462 Quercus lobata HOM05D002263 ORTHO05D012916 9.1e-07 57.8 110 41.8
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 1.2e-06 57.4 137 37.2
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 1.2e-06 57.4 205 34.6
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 1.2e-06 57.4 135 36.3
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 1.6e-06 57.0 147 38.1
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 1.6e-06 57.0 149 37.6
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 1.6e-06 57.0 88 47.7
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 2.0e-06 56.6 167 36.5
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 2.0e-06 56.6 101 39.6
QL08p037214 Quercus lobata HOM05D002263 ORTHO05D005465 2.0e-06 56.6 104 43.3
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 2.6e-06 56.2 161 37.9
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 2.6e-06 56.2 129 37.2
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 3.5e-06 55.8 100 42.0
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 4.5e-06 55.5 129 40.3
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 4.5e-06 55.5 101 39.6
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 4.5e-06 55.5 101 39.6
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 4.5e-06 55.5 107 42.1
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 4.5e-06 55.5 147 36.1
A03p58560 Brassica napus HOM05D002263 ORTHO05D013693 5.9e-06 55.1 88 42.0
BraA03t14916Z Brassica rapa HOM05D002263 ORTHO05D013693 5.9e-06 55.1 88 42.0
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 5.9e-06 55.1 172 36.0
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 7.7e-06 54.7 135 41.5
MBI02_g23142_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D012916 7.7e-06 54.7 145 37.2


User provided reference genes

Program Settings