Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 3.3e-95 351.7 172 100.0
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 3.6e-62 241.9 171 73.1
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 3.1e-61 238.8 175 71.4
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 9.9e-60 233.8 166 72.3
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 3.0e-56 222.2 163 66.9
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 3.0e-56 222.2 163 66.9
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 6.6e-56 221.1 164 65.9
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 2.1e-54 216.1 163 65.6
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.1e-54 216.1 166 63.3
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 2.8e-54 215.7 163 65.6
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 4.8e-54 214.9 164 62.8
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 1.8e-53 213.0 166 62.0
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 3.1e-53 212.2 164 62.8
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 3.1e-53 212.2 162 63.0
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 3.1e-53 212.2 160 64.4
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 4.0e-53 211.8 162 64.8
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 5.3e-53 211.5 163 65.6
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 2.0e-52 209.5 163 61.3
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 6.4e-51 204.5 163 59.5
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 8.4e-51 204.1 166 62.0
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 7.1e-50 201.1 161 62.1
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 7.1e-50 201.1 155 63.9
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 1.6e-49 199.9 161 62.1
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 2.7e-49 199.1 163 61.3
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 4.6e-49 198.4 163 58.3
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 6.0e-49 198.0 159 61.0
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 6.0e-49 198.0 160 61.2
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 7.9e-49 197.6 163 58.3
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 7.9e-49 197.6 161 61.5
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 1.0e-48 197.2 163 57.7
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 3.0e-48 195.7 153 62.1
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 5.1e-48 194.9 161 60.9
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 5.1e-48 194.9 160 59.4
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 1.5e-47 193.4 154 64.3
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 2.5e-47 192.6 159 57.2
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 2.5e-47 192.6 160 61.2
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 3.3e-47 192.2 163 59.5
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 7.4e-47 191.0 156 61.5
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 9.6e-47 190.7 161 58.4
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 1.3e-46 190.3 170 53.5
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 1.3e-46 190.3 166 56.6
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 1.3e-46 190.3 158 58.2
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 1.6e-46 189.9 161 59.0
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 8.1e-46 187.6 162 58.0
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 1.4e-45 186.8 162 59.3
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 2.4e-45 186.0 162 56.8
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 3.1e-45 185.7 158 58.9
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 6.9e-45 184.5 166 55.4
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 6.9e-45 184.5 160 58.1
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 9.0e-45 184.1 164 56.7
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 2.6e-44 182.6 160 58.1
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 3.4e-44 182.2 163 53.4
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 4.5e-44 181.8 165 50.3
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 7.6e-44 181.0 158 57.0
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 7.6e-44 181.0 159 55.3
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 9.9e-44 180.6 160 56.9
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 1.7e-43 179.9 159 56.0
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.4e-42 176.0 160 55.0
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 2.4e-42 176.0 166 54.2
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 3.2e-42 175.6 159 56.0
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 3.2e-42 175.6 161 50.9
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.2e-42 175.3 159 55.3
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 4.2e-42 175.3 161 51.6
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 5.5e-42 174.9 162 56.8
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 1.2e-41 173.7 161 51.6
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 2.7e-41 172.6 158 56.3
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.3e-40 170.2 161 53.4
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 1.8e-40 169.9 164 52.4
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 3.9e-40 168.7 157 54.1
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 3.9e-40 168.7 164 52.4
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 3.9e-40 168.7 151 52.3
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 5.1e-40 168.3 154 55.2
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 4.3e-39 165.2 165 53.3
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 3.7e-38 162.2 155 52.3
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 1.4e-37 160.2 165 52.7
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 5.3e-37 158.3 122 59.0
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 4.5e-36 155.2 161 50.9
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 4.5e-36 155.2 148 54.1
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 1.3e-35 153.7 151 52.3
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 2.9e-35 152.5 166 50.6
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 6.5e-35 151.4 162 48.8
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 6.5e-35 151.4 160 52.5
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 1.1e-34 150.6 156 51.9
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 1.9e-34 149.8 157 51.6
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 4.2e-34 148.7 160 50.0
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 7.1e-34 147.9 130 58.5
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 9.3e-34 147.5 162 48.1
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 1.2e-33 147.1 159 49.1
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 2.7e-33 146.0 163 47.2
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 6.0e-33 144.8 159 46.5
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 7.9e-33 144.4 162 48.8
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 1.0e-32 144.1 164 48.8
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 1.8e-32 143.3 152 53.9
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 2.3e-32 142.9 164 48.2
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 2.3e-32 142.9 164 48.8
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 2.3e-32 142.9 164 48.2
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 2.3e-32 142.9 164 48.2
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 1.9e-31 139.8 162 48.1
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 1.6e-30 136.7 164 46.3
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 2.2e-30 136.3 158 48.1
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.4e-29 132.9 159 44.7
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 9.0e-29 131.0 173 41.0
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 1.5e-28 130.2 159 42.8
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 1.5e-28 130.2 126 50.0
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 2.0e-28 129.8 155 44.5
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 5.9e-28 128.3 159 43.4
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 1.0e-27 127.5 167 40.7
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 9.3e-26 120.9 160 43.8
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 4.1e-21 105.5 157 40.1
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 1.7e-19 100.1 130 37.7
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 3.8e-19 99.0 154 33.8
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 2.3e-16 89.7 64 59.4
Sc05g0001360 Simmondsia chinensis HOM05D007082 ORTHO05D008895 6.5e-11 71.6 142 33.8
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 1.9e-10 70.1 102 39.2
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 2.5e-10 69.7 113 35.4
Peaxi162Scf01115g00007 Petunia axillaris HOM05D007082 ORTHO05D008895 2.6e-07 59.7 64 51.6
PGSC0003DMG400045025 Solanum tuberosum HOM05D007082 ORTHO05D008895 8.2e-06 54.7 60 45.0


User provided reference genes

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