Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 9.4e-193 676.8 366 100.0
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 1.9e-140 503.1 373 74.8
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 5.2e-135 485.0 382 72.0
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 4.9e-133 478.4 372 72.0
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 5.9e-94 348.6 245 73.1
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 1.7e-88 330.5 233 72.5
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 1.7e-88 330.5 219 75.3
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 2.2e-88 330.1 259 66.8
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 2.8e-88 329.7 269 64.7
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 6.3e-88 328.6 283 61.8
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 5.3e-87 325.5 219 75.3
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 5.3e-87 325.5 350 56.0
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 2.9e-85 319.7 260 64.6
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.5e-84 316.6 353 52.7
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 2.5e-84 316.6 238 68.1
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 4.2e-84 315.8 281 60.1
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 5.5e-84 315.5 368 51.4
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 9.4e-84 314.7 266 61.3
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 2.1e-83 313.5 246 64.6
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 4.7e-83 312.4 218 72.5
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.4e-82 310.8 218 72.0
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 8.8e-82 308.1 236 65.3
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 5.7e-81 305.4 268 60.4
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 7.4e-81 305.1 199 77.4
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 7.4e-81 305.1 232 70.7
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 7.4e-81 305.1 242 64.9
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 9.7e-81 304.7 232 65.1
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.8e-80 303.1 246 62.6
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 2.8e-80 303.1 246 63.0
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 3.7e-80 302.8 249 64.3
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 8.2e-80 301.6 259 60.6
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 1.8e-79 300.4 247 62.3
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 3.1e-79 299.7 266 58.3
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.3e-79 298.9 254 60.6
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 7.0e-79 298.5 241 66.4
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 1.2e-78 297.7 250 62.8
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 1.2e-78 297.7 258 60.5
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 1.6e-78 297.4 264 57.6
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 2.0e-78 297.0 219 66.7
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.5e-78 296.2 239 65.3
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 1.3e-77 294.3 298 56.7
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 1.7e-77 293.9 254 60.2
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 3.8e-77 292.7 261 57.9
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 5.0e-77 292.4 257 58.8
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 5.0e-77 292.4 222 64.9
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.5e-77 292.0 227 65.6
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 8.5e-77 291.6 249 62.2
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 1.5e-76 290.8 220 69.1
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.9e-76 290.4 259 59.1
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 5.5e-76 288.9 220 69.1
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 5.5e-76 288.9 208 66.8
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 7.2e-76 288.5 244 63.1
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 9.4e-76 288.1 260 59.2
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 9.4e-76 288.1 253 59.3
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.6e-75 287.3 258 61.6
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 3.6e-75 286.2 218 64.7
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 4.7e-75 285.8 232 63.8
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 6.1e-75 285.4 227 64.8
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 6.1e-75 285.4 260 59.2
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 8.0e-75 285.0 258 57.4
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 8.0e-75 285.0 257 61.9
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 8.0e-75 285.0 394 46.7
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.8e-74 283.9 242 60.3
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.8e-74 283.9 258 60.9
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 4.0e-74 282.7 197 72.1
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 5.2e-74 282.3 259 59.5
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 8.8e-74 281.6 220 64.1
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 8.8e-74 281.6 254 58.7
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 1.5e-73 280.8 222 62.6
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 2.6e-73 280.0 234 62.8
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 3.3e-73 279.6 258 57.0
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 9.7e-73 278.1 219 62.6
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 9.7e-73 278.1 199 69.3
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.7e-72 277.3 214 66.4
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 1.7e-72 277.3 281 55.9
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 2.2e-72 276.9 243 60.9
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 2.8e-72 276.6 210 64.3
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 2.8e-72 276.6 219 63.9
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 3.7e-72 276.2 255 58.0
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.4e-71 274.2 202 71.8
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 1.4e-71 274.2 224 59.4
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 1.8e-71 273.9 257 56.8
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 2.4e-71 273.5 227 62.6
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 5.3e-71 272.3 213 62.9
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 5.3e-71 272.3 213 62.9
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 1.6e-70 270.8 345 48.7
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 2.0e-70 270.4 205 63.9
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 7.7e-70 268.5 247 57.9
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.3e-69 267.7 242 57.4
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.7e-69 267.3 217 61.8
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 8.5e-69 265.0 251 54.2
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 1.5e-68 264.2 159 81.1
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 3.6e-67 259.6 214 62.6
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 2.3e-66 256.9 229 57.2
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 2.3e-66 256.9 214 60.7
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 2.3e-66 256.9 232 59.9
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 1.2e-65 254.6 211 62.1
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.7e-64 250.8 218 58.7
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.8e-64 250.0 199 63.3
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.4e-63 247.7 206 61.2
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.4e-63 246.9 206 61.2
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 4.1e-63 246.1 174 71.3
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.4e-63 245.7 206 60.7
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 5.4e-63 245.7 170 74.1
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 9.1e-63 245.0 206 60.7
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.6e-62 244.2 195 63.6
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 5.9e-62 242.3 214 55.6
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 3.8e-61 239.6 268 48.9
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 1.9e-60 237.3 263 51.0
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 4.2e-60 236.1 157 72.0
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 1.2e-59 234.6 266 47.0
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.8e-59 233.4 257 52.5
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 1.4e-58 231.1 214 57.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 1.8e-58 230.7 264 49.2
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 8.8e-58 228.4 164 69.5
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.3e-56 224.6 230 51.7
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 4.1e-55 219.5 165 72.1
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.6e-51 206.5 152 71.7
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 1.8e-50 204.1 181 57.5
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 4.3e-44 183.0 114 76.3
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 8.0e-43 178.7 169 49.7
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 7.5e-41 172.2 169 53.8
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 6.6e-37 159.1 266 39.1
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 3.1e-34 150.2 115 66.1
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 5.2e-34 149.4 155 62.6
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 6.8e-34 149.1 136 58.1
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 9.8e-33 145.2 134 56.7
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.3e-32 144.8 109 65.1
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 1.1e-31 141.7 197 45.7
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 1.3e-29 134.8 139 50.4
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 1.3e-29 134.8 170 44.7
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 2.5e-20 104.0 141 46.1
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 5.1e-13 79.7 89 48.3
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.6e-09 67.4 93 41.9
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 2.9e-08 63.9 74 48.6
Cc02_g24380 Coffea canephora HOM05D005088 ORTHO05D006914 4.9e-08 63.2 57 54.4
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 1.4e-07 61.6 69 50.7
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 1.4e-07 61.6 69 50.7


User provided reference genes

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