Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 2.0e-194 682.2 333 100.0
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.7e-169 599.4 335 88.1
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 2.3e-161 572.4 339 84.4
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 4.3e-160 568.2 337 84.3
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.4e-142 510.0 336 75.3
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 5.3e-142 508.1 319 77.7
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 1.5e-141 506.5 324 75.3
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 3.4e-141 505.4 336 75.0
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 5.8e-141 504.6 336 74.7
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 5.8e-141 504.6 312 77.2
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 1.3e-140 503.4 338 73.7
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 2.2e-140 502.7 324 75.3
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 8.4e-140 500.7 336 73.8
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 1.1e-139 500.4 334 74.3
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.4e-139 500.0 342 72.5
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.9e-139 499.6 332 73.5
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 2.4e-139 499.2 335 74.0
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 5.4e-139 498.0 328 73.8
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 7.1e-139 497.7 320 76.6
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 2.7e-138 495.7 336 73.2
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.3e-137 493.4 316 75.6
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 3.0e-137 492.3 339 72.0
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 6.7e-137 491.1 332 72.9
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 8.7e-137 490.7 333 72.1
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 1.1e-136 490.3 336 71.7
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 9.6e-136 487.3 326 73.3
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.1e-134 483.8 323 73.7
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.8e-134 483.0 307 74.6
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 2.4e-134 482.6 336 71.7
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 9.0e-134 480.7 336 70.2
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 2.6e-133 479.2 326 70.6
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 3.4e-133 478.8 340 69.4
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 2.9e-132 475.7 339 70.8
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 4.9e-132 474.9 344 69.8
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 8.4e-132 474.2 326 71.8
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 8.4e-132 474.2 323 71.8
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 8.4e-132 474.2 326 70.6
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 8.4e-132 474.2 324 71.6
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 1.1e-131 473.8 337 70.6
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.1e-131 473.8 312 74.0
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.1e-131 473.8 322 70.8
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 3.2e-131 472.2 322 70.5
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 5.5e-131 471.5 320 71.9
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 1.2e-130 470.3 328 69.8
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.2e-130 470.3 336 69.6
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 4.6e-130 468.4 319 70.8
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 3.0e-129 465.7 335 70.1
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 6.7e-129 464.5 284 78.2
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.1e-128 463.8 323 70.9
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 1.5e-128 463.4 342 71.1
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.5e-128 463.4 321 70.1
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.5e-128 462.6 313 72.5
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 4.3e-128 461.8 342 71.1
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.3e-127 460.3 324 71.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.6e-127 459.9 335 67.2
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 1.6e-127 459.9 312 70.8
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.1e-126 457.2 319 70.2
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.1e-126 457.2 330 68.8
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 1.8e-126 456.4 315 69.2
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 1.8e-126 456.4 320 71.9
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 1.8e-126 456.4 343 69.1
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 1.5e-125 453.4 314 71.0
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 1.0e-124 450.7 294 74.5
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.1e-123 447.2 341 65.7
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.6e-122 443.4 268 78.4
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 2.1e-122 443.0 317 69.4
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.7e-122 442.6 295 72.5
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 2.7e-122 442.6 295 72.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 6.0e-122 441.4 272 77.2
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 1.8e-121 439.9 295 72.2
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 1.8e-121 439.9 295 72.2
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 3.9e-121 438.7 306 70.9
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 6.7e-121 438.0 319 68.0
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 6.7e-121 438.0 309 70.9
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 6.7e-121 438.0 295 71.9
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 6.7e-121 438.0 316 70.3
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.1e-120 437.2 327 66.7
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 1.1e-120 437.2 340 63.5
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.9e-120 436.4 338 65.7
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.3e-120 435.3 286 73.8
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.7e-120 434.9 294 70.1
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 1.8e-118 429.9 284 73.9
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.3e-118 428.3 284 71.8
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 6.9e-118 427.9 327 65.7
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 5.9e-117 424.9 306 69.6
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 6.5e-116 421.4 326 64.1
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 6.5e-116 421.4 239 82.0
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 5.5e-115 418.3 232 85.3
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 9.4e-115 417.5 311 66.9
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 1.6e-114 416.8 324 67.0
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.8e-113 413.3 325 64.9
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 3.0e-113 412.5 321 65.7
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.7e-111 405.6 270 71.1
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 8.2e-111 404.4 235 80.4
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 5.0e-108 395.2 340 60.6
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.4e-107 393.7 217 84.8
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.2e-107 392.5 299 65.6
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 1.4e-102 377.1 304 62.5
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.0e-97 359.4 312 59.6
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 2.2e-92 343.2 233 67.8
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.5e-91 340.5 287 59.2
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.0e-89 332.8 179 86.6
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.0e-89 332.8 179 86.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.6e-82 310.5 282 53.2
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.0e-81 307.8 244 65.2
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.3e-76 290.8 197 72.6
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 2.3e-73 280.0 201 65.7
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 3.6e-66 256.1 189 63.5
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 3.2e-62 243.0 150 77.3
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 1.2e-61 241.1 202 61.4
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 8.6e-44 181.8 167 52.1
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 4.3e-35 152.9 130 59.2
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.1e-30 138.3 78 78.2
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 9.0e-25 118.6 144 48.6
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.3e-19 99.8 59 76.3
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 5.3e-17 92.8 250 34.0
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 9.6e-11 72.0 52 67.3
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 7.2e-06 55.8 173 27.7


User provided reference genes

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